[med-svn] [getdata] annotated tag upstream/0.2 created (now 3003d86)

[Andreas Tille]

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tille pushed a change to annotated tag upstream/0.2
in repository getdata.

        at  3003d86   (tag)
   tagging  b5b36be731728c7eb1cc3eb3000d44bb7a82591a (commit)
 tagged by  Andreas Tille
        on  Thu Nov 30 22:23:02 2017 +0100

- Log -----------------------------------------------------------------
Upstream version 0.2

Andreas Tille (6):
      Fixed Vcs fields, bumped standards-version
      Commit uncommited files
      Moved packaging from SVN to Git
      Use source/format = 3.0 (native) and use proper upstream tarball
      New upstream version 0.2
      New upstream version 0.2

Charles Plessy (27):
      Makes a buildable Debian package
      Another way to get Jasper.
      Since $sharedWgetOptions has --no-host-directories, the script should not look in ftp.ebi.ac.uk.
      Added Human RefSeq and ENSEMBL.
      Changed default directory to `/var/lib/getdata'.
      Corrections to make the "confd" system work.
      Exploring the possibility of using makefiles:
      Correcting stupid mistakes.
      Better have the output on STDOUT than STDERR…
      Preliminary Rfam support.
      Added limited support for mouse RefSeq, and a changelog.
      Factorised code and added mouse genome.
      Added rat
      Added ITP number and VCS URLs.
      getData.conf.d/mouse.getData.mk: upgraded to build NCBIM37.55.
      Added human genome build GRCh37.56.
      Corrected a typo that prevented to download human RefSeq.
      How to handle RefSeq downloads ?
      Native package.
      getData does not work out of the box for the moment.
      Normalised with config-model-edit ; conforms with Policy 3.9.5.
      Using Debhelper 9.
      Switch back to source format 1.0.
      Machine-readable Debian copyright file.
      Updated upstream version.
      Use canonical VCS URLs.
      getdata (0.2-1) unstable; urgency=low

Steffen Moeller (20):
      Some bits towards a package for data management.
      Added KEGG in XML format.
      Added gene ontology, verbose option and Charles as co-author.
      Nicified changelogs.
      Added TrEMBL (protein sequence data maintained at the European Bioinformatics Institute)
      Working towards an automated indexing for Emboss.
      Automated indexing should work for TrEMBL now.
      SWISS-PROT works.
      Fix of config display.
      Added Pfam A,B,C, no unpacking yet, though.
      * getData can now read its configuration from separate files.
      * added --remove
      Added copyright info to Makfile.
      * brining man page as txt file into SVN to be referenceable
      Series of changes towards a first upload.
      Series of updates preparing for an upload.
      Removed templates and corrected bits.
      Updated path to and treatment of DE405 data after an URL change.
      Added gwascatalog to databases.
      Updated and extended download and processing of genomes

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This annotated tag includes the following new commits:

       new  b5b36be   New upstream version 0.2

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


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