[med-svn] [mash] branch upstream updated (9aed75a -> 4ad406c)

[Sascha Steinbiss]

This is an automated email from the git hooks/post-receive script.

satta pushed a change to branch upstream
in repository mash.

      from  9aed75a   Imported Upstream version 1.1.1
       new  4ad406c   New upstream version 2.0

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .gitignore                        |   9 +
 INSTALL.txt                       |   2 +-
 Makefile.in                       |   3 +-
 doc/sphinx/tutorials.rst          |  14 +-
 src/mash/Command.cpp              |  24 +-
 src/mash/Command.h                |   4 +
 src/mash/CommandBounds.cpp        |  97 +++--
 src/mash/CommandBounds.h          |   4 +
 src/mash/CommandContain.cpp       |   5 +
 src/mash/CommandContain.h         |   4 +
 src/mash/CommandDistance.cpp      |   7 +-
 src/mash/CommandDistance.h        |   4 +
 src/mash/CommandFind.cpp          |  14 +-
 src/mash/CommandFind.h            |   4 +
 src/mash/CommandInfo.cpp          |  61 ++-
 src/mash/CommandInfo.h            |   4 +
 src/mash/CommandList.cpp          |  13 +-
 src/mash/CommandList.h            |   4 +
 src/mash/CommandPaste.cpp         |  12 +-
 src/mash/CommandPaste.h           |   4 +
 src/mash/CommandScreen.cpp        | 844 ++++++++++++++++++++++++++++++++++++++
 src/mash/CommandScreen.h          | 163 ++++++++
 src/mash/CommandSketch.cpp        |  17 +-
 src/mash/CommandSketch.h          |   4 +
 src/mash/MinHashHeap.h            |   4 +-
 src/mash/Sketch.cpp               |  46 ++-
 src/mash/Sketch.h                 |  10 +-
 src/mash/capnp/MinHash.capnp      |   4 +-
 src/mash/hash.cpp                 |   2 +-
 src/mash/hash.h                   |   4 +-
 src/mash/mash.cpp                 |  20 +-
 src/mash/schema-1.0.0.json        | 150 +++++++
 src/mash/sketchParameterSetup.cpp |   7 +-
 src/mash/sketchParameterSetup.h   |   4 +
 src/mash/version.h                |   2 +-
 35 files changed, 1467 insertions(+), 107 deletions(-)
 create mode 100644 .gitignore
 create mode 100644 src/mash/CommandScreen.cpp
 create mode 100644 src/mash/CommandScreen.h
 create mode 100644 src/mash/schema-1.0.0.json

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