[med-svn] [r-cran-bold] 07/12: Updated version 0.4.0 from 'upstream/0.4.0'

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository r-cran-bold.

commit 170742b80a9f67c42ef51d3d84f196cb7c9049e8
Merge: d0b5922 415c774
Author: Andreas Tille <tille at debian.org>
Date:   Sun Oct 1 22:30:01 2017 +0200

    Updated version 0.4.0 from 'upstream/0.4.0'
    
    with Debian dir 41f78a2056ec3194a5b05139caaf860b23d43bb9

 DESCRIPTION                          |  25 ++
 LICENSE                              |   2 +
 MD5                                  |  39 +++
 NAMESPACE                            |  40 +++
 NEWS.md                              | 118 +++++++
 R/bold-package.R                     |  44 +++
 R/bold_filter.R                      |  44 +++
 R/bold_identify.R                    |  93 ++++++
 R/bold_identify_parents.R            |  95 ++++++
 R/bold_seq.R                         |  71 +++++
 R/bold_seqspec.R                     |  87 +++++
 R/bold_specimens.R                   |  57 ++++
 R/bold_tax_id.R                      |  65 ++++
 R/bold_tax_name.R                    |  53 ++++
 R/bold_trace.R                       |  90 ++++++
 R/zzz.R                              |  81 +++++
 README.md                            | 171 ++++++++++
 build/vignette.rds                   | Bin 0 -> 202 bytes
 data/sequences.RData                 | Bin 0 -> 661 bytes
 inst/doc/bold_vignette.Rmd           | 439 +++++++++++++++++++++++++
 inst/doc/bold_vignette.html          | 599 +++++++++++++++++++++++++++++++++++
 man/bold-package.Rd                  |  38 +++
 man/bold_filter.Rd                   |  41 +++
 man/bold_identify.Rd                 |  73 +++++
 man/bold_identify_parents.Rd         |  57 ++++
 man/bold_seq.Rd                      |  79 +++++
 man/bold_seqspec.Rd                  |  87 +++++
 man/bold_specimens.Rd                |  69 ++++
 man/bold_tax_id.Rd                   |  66 ++++
 man/bold_tax_name.Rd                 |  56 ++++
 man/bold_trace.Rd                    |  82 +++++
 man/sequences.Rd                     |  16 +
 tests/test-all.R                     |   2 +
 tests/testthat/test-bold_identify.R  |  36 +++
 tests/testthat/test-bold_seq.R       |  30 ++
 tests/testthat/test-bold_seqspec.R   |  32 ++
 tests/testthat/test-bold_specimens.R |  35 ++
 tests/testthat/test-bold_tax_id.R    |  74 +++++
 tests/testthat/test-bold_tax_name.R  |  33 ++
 vignettes/bold_vignette.Rmd          | 439 +++++++++++++++++++++++++
 40 files changed, 3558 insertions(+)

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