[med-svn] [r-cran-bold] 12/12: Updated version 0.5.0 from 'upstream/0.5.0'

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository r-cran-bold.

commit 3ffba8e4ce3533b97c924166f3981d930b8b3714
Merge: d852fdf d0dace4
Author: Andreas Tille <tille at debian.org>
Date:   Sun Oct 1 22:37:47 2017 +0200

    Updated version 0.5.0 from 'upstream/0.5.0'
    
    with Debian dir 27996929c6fa9121426114b4c159bb56e5773b95

 DESCRIPTION                          |  24 +++---
 MD5                                  |  70 +++++++++---------
 NAMESPACE                            |  15 +---
 NEWS.md                              |  28 +++++++
 R/bold-package.R                     |  28 +++----
 R/bold_filter.R                      |  28 +++----
 R/bold_identify.R                    |  25 ++++---
 R/bold_identify_parents.R            |  62 +++++++++-------
 R/bold_seq.R                         |  14 ++--
 R/bold_seqspec.R                     |  70 +++++++++---------
 R/bold_specimens.R                   |  27 +++----
 R/bold_stats.R                       |  58 +++++++++++++++
 R/bold_tax_id.R                      |  20 +++--
 R/bold_tax_name.R                    |  31 ++++----
 R/bold_trace.R                       |  41 +++++-----
 R/zzz.R                              |  35 +++++----
 README.md                            | 131 ++++++++++++++++++--------------
 build/vignette.rds                   | Bin 202 -> 202 bytes
 inst/doc/bold_vignette.Rmd           | 140 +++++++++++++++--------------------
 inst/doc/bold_vignette.html          | 140 +++++++++++++++--------------------
 man/bold-package.Rd                  |  17 +++--
 man/bold_filter.Rd                   |  17 ++---
 man/bold_identify.Rd                 |  11 +--
 man/bold_identify_parents.Rd         |  27 ++++---
 man/bold_seq.Rd                      |  49 ++++++------
 man/bold_seqspec.Rd                  |  74 +++++++++---------
 man/bold_specimens.Rd                |  57 +++++++-------
 man/bold_stats.Rd                    |  83 +++++++++++++++++++++
 man/bold_tax_id.Rd                   |  18 ++---
 man/bold_tax_name.Rd                 |  20 ++---
 man/bold_trace.Rd                    |  42 +++++------
 man/sequences.Rd                     |   1 -
 tests/testthat/test-bold_identify.R  |   2 +-
 tests/testthat/test-bold_seq.R       |   8 +-
 tests/testthat/test-bold_seqspec.R   |   6 +-
 tests/testthat/test-bold_specimens.R |  12 ++-
 vignettes/bold_vignette.Rmd          | 140 +++++++++++++++--------------------
 37 files changed, 859 insertions(+), 712 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-cran-bold.git