[med-svn] [bowtie] 08/09: Re-introduce no_hash_style_both_for_mips.patch back fixing build on mips64el

[Alex Mestiashvili]

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malex-guest pushed a commit to branch master
in repository bowtie.

commit f082722930ea5bd923be315bef217d353089839b
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Thu Oct 19 17:25:08 2017 +0200

    Re-introduce no_hash_style_both_for_mips.patch back fixing build on mips64el
---
 debian/patches/no_hash_style_both_for_mips.patch | 19 +++++++++++++++++++
 debian/patches/series                            |  1 +
 2 files changed, 20 insertions(+)

diff --git a/debian/patches/no_hash_style_both_for_mips.patch b/debian/patches/no_hash_style_both_for_mips.patch
index e69de29..0b60544 100644
--- a/debian/patches/no_hash_style_both_for_mips.patch
+++ b/debian/patches/no_hash_style_both_for_mips.patch
@@ -0,0 +1,19 @@
+Description: No_hash_style_both_for_mips
+ cription: Disable -Wl,--hash-style=both on mips machines.
+  It's not supported on mips and mipsel ports and leads to build errors.
+Forwarded: not-needed
+Author: Ognyan Kulev <ogi at debian.org>
+Last-Update: 2017-10-19
+--- bowtie.orig/Makefile
++++ bowtie/Makefile
+@@ -59,7 +59,9 @@
+ LINUX = 0
+ ifneq (,$(findstring Linux,$(shell uname)))
+     LINUX = 1
+-    override EXTRA_FLAGS += -Wl,--hash-style=both
++	ifeq (,$(findstring mips,$(shell uname -m)))
++		EXTRA_FLAGS += -Wl,--hash-style=both
++	endif
+ endif
+ 
+ MM_DEF = 
diff --git a/debian/patches/series b/debian/patches/series
index 3017056..40e8b45 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1,3 +1,4 @@
+no_hash_style_both_for_mips.patch
 use-dpkg-buildflags.patch
 use_debian_seqan.patch
 seqan-fix-setBegin-call.patch

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