[med-svn] [freebayes] branch master updated (a06c13f -> 150a1f1)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository freebayes.

      from  a06c13f   Commit as freebayes was uploaded
       new  150a1f1   Mass commit of freebayes 1.1.0 packaging, the Git archive is quite spoiled but I do not think that the history is really interesting.

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 debian/README.source                               |  11 +
 debian/bamleftalign.1                              |  27 --
 debian/changelog                                   |   6 +
 debian/control                                     |   9 +-
 debian/copyright                                   | 428 +------------------
 debian/createmanpages                              |  28 ++
 debian/freebayes.1                                 | 459 ---------------------
 debian/manpages                                    |   1 -
 debian/patches/fix_test.patch                      |   8 +
 debian/patches/series                              |   3 +
 debian/patches/use_debian_packaged_bamtools.patch  |  68 +--
 .../patches/use_debian_packaged_libjsoncpp.patch   |  17 +
 debian/patches/use_debian_packaged_seqlib.patch    |  87 ++++
 debian/patches/use_debian_packaged_vcflib.patch    | 271 ++----------
 debian/patches/vcffirstheader.patch                |  29 ++
 debian/rules                                       |   6 +-
 debian/test-simple-bash/lib/test-simple.bash       | 110 +++++
 debian/test-simple-bash/test/basics.t              |  26 ++
 debian/test-simple-bash/test/doc.t                 |  15 +
 debian/test-simple-bash/test/no-label.t            |  25 ++
 20 files changed, 444 insertions(+), 1190 deletions(-)
 create mode 100644 debian/README.source
 delete mode 100644 debian/bamleftalign.1
 create mode 100755 debian/createmanpages
 delete mode 100644 debian/freebayes.1
 delete mode 100644 debian/manpages
 create mode 100644 debian/patches/use_debian_packaged_libjsoncpp.patch
 create mode 100644 debian/patches/use_debian_packaged_seqlib.patch
 create mode 100644 debian/patches/vcffirstheader.patch
 create mode 100644 debian/test-simple-bash/lib/test-simple.bash
 create mode 100644 debian/test-simple-bash/test/basics.t
 create mode 100644 debian/test-simple-bash/test/doc.t
 create mode 100644 debian/test-simple-bash/test/no-label.t

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/freebayes.git