[med-svn] r24002 - trunk/packages/R/r-cran-phylobase/trunk/debian

[Andreas Tille]

Author: tille
Date: 2017-09-07 20:53:10 +0000 (Thu, 07 Sep 2017)
New Revision: 24002

Modified:
   trunk/packages/R/r-cran-phylobase/trunk/debian/changelog
   trunk/packages/R/r-cran-phylobase/trunk/debian/compat
   trunk/packages/R/r-cran-phylobase/trunk/debian/control
   trunk/packages/R/r-cran-phylobase/trunk/debian/copyright
   trunk/packages/R/r-cran-phylobase/trunk/debian/rules
Log:
  * New upstream version
  * debhelper 10
  * use dh-r instead of cdbs
  * canonical Homepage for CRAN packages
  * Standards-Version: 4.1.0 (no changes needed)


Modified: trunk/packages/R/r-cran-phylobase/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-phylobase/trunk/debian/changelog	2017-09-07 19:57:56 UTC (rev 24001)
+++ trunk/packages/R/r-cran-phylobase/trunk/debian/changelog	2017-09-07 20:53:10 UTC (rev 24002)
@@ -1,3 +1,13 @@
+r-cran-phylobase (0.8.4-1) unstable; urgency=medium
+
+  * New upstream version
+  * debhelper 10
+  * use dh-r instead of cdbs
+  * canonical Homepage for CRAN packages
+  * Standards-Version: 4.1.0 (no changes needed)
+
+ -- Andreas Tille <tille at debian.org>  Thu, 07 Sep 2017 22:38:05 +0200
+
 r-cran-phylobase (0.8.2-1) unstable; urgency=low
 
   * Initial release (Closes: #820520)

Modified: trunk/packages/R/r-cran-phylobase/trunk/debian/compat
===================================================================
--- trunk/packages/R/r-cran-phylobase/trunk/debian/compat	2017-09-07 19:57:56 UTC (rev 24001)
+++ trunk/packages/R/r-cran-phylobase/trunk/debian/compat	2017-09-07 20:53:10 UTC (rev 24002)
@@ -1 +1 @@
-9
+10

Modified: trunk/packages/R/r-cran-phylobase/trunk/debian/control
===================================================================
--- trunk/packages/R/r-cran-phylobase/trunk/debian/control	2017-09-07 19:57:56 UTC (rev 24001)
+++ trunk/packages/R/r-cran-phylobase/trunk/debian/control	2017-09-07 20:53:10 UTC (rev 24002)
@@ -3,28 +3,26 @@
 Uploaders: Andreas Tille <tille at debian.org>
 Section: gnu-r
 Priority: optional
-Build-Depends: debhelper (>= 9),
-               cdbs,
+Build-Depends: debhelper (>= 10),
+               dh-r,
                r-base-dev,
                r-cran-ape,
                r-cran-ade4,
                r-cran-rcpp,
                r-cran-rncl,
                r-cran-rnexml
-Standards-Version: 3.9.8
+Standards-Version: 4.1.0
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-phylobase/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-phylobase/trunk/
-Homepage: https://cran.r-project.org/web/packages/phylobase/
+Homepage: https://cran.r-project.org/package=phylobase
 
 Package: r-cran-phylobase
 Architecture: any
-Depends: ${misc:Depends},
-         ${shlibs:Depends},
-         ${R:Depends},
-         r-cran-ape,
-         r-cran-ade4,
-         r-cran-rncl,
-         r-cran-rnexml
+Depends: ${shlibs:Depends},
+         ${misc:Depends},
+         ${R:Depends}
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
 Description: GNU R base package for phylogenetic structures and comparative data
  This R package provides a base S4 class for comparative methods,
  incorporating one or more trees and trait data as these are used in

Modified: trunk/packages/R/r-cran-phylobase/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-phylobase/trunk/debian/copyright	2017-09-07 19:57:56 UTC (rev 24001)
+++ trunk/packages/R/r-cran-phylobase/trunk/debian/copyright	2017-09-07 20:53:10 UTC (rev 24002)
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Contact: Francois Michonneau <francois.michonneau at gmail.com>
 Source: https://cran.r-project.org/web/packages/phylobase/
 

Modified: trunk/packages/R/r-cran-phylobase/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-cran-phylobase/trunk/debian/rules	2017-09-07 19:57:56 UTC (rev 24001)
+++ trunk/packages/R/r-cran-phylobase/trunk/debian/rules	2017-09-07 20:53:10 UTC (rev 24002)
@@ -1,6 +1,8 @@
 #!/usr/bin/make -f
 
-include /usr/share/R/debian/r-cran.mk
+%:
+	dh $@ --buildsystem R
 
-install/$(package)::
-	chmod -x $(debRlib)/$(cranName)/nexusfiles/co1.nex
+override_dh_fixperms:
+	dh_fixperms
+	find debian -name co1.nex -exec chmod -x \{\} \;