[med-svn] [r-bioc-edger] 03/03: Adapt patch to new version
Andreas Tille
tille at debian.org
Fri Sep 8 19:15:18 UTC 2017
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tille pushed a commit to branch master
in repository r-bioc-edger.
commit 62f6a932818f53de8b96a7385e11afec76228859
Author: Andreas Tille <tille at debian.org>
Date: Fri Sep 8 21:10:12 2017 +0200
Adapt patch to new version
---
debian/changelog | 2 +-
debian/patches/do_not_attempt_locfit_test.patch | 4 ++--
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/debian/changelog b/debian/changelog
index 33c0321..173baab 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,4 +1,4 @@
-r-bioc-edger (3.16.5+dfsg-1) UNRELEASED; urgency=medium
+r-bioc-edger (3.18.1+dfsg-1) UNRELEASED; urgency=medium
TODO: this version really seems to need locfit - do we want to do
another try to free this code?
diff --git a/debian/patches/do_not_attempt_locfit_test.patch b/debian/patches/do_not_attempt_locfit_test.patch
index 166c390..181b890 100644
--- a/debian/patches/do_not_attempt_locfit_test.patch
+++ b/debian/patches/do_not_attempt_locfit_test.patch
@@ -45,7 +45,7 @@ Description: r-cran-locfit has a non-free license and thus can not be packaged
-> dglm2 <- estimateDisp(dglm, design)
-> summary(dglm2$tagwise.dispersion)
- Min. 1st Qu. Median Mean 3rd Qu. Max.
-- 0.1766 0.1789 0.1814 0.1846 0.1870 0.2119
+- 0.1423 0.1618 0.1788 0.1863 0.2015 0.2692
-> dglm2 <- estimateDisp(dglm, design, prior.df=20)
-> summary(dglm2$tagwise.dispersion)
- Min. 1st Qu. Median Mean 3rd Qu. Max.
@@ -53,7 +53,7 @@ Description: r-cran-locfit has a non-free license and thus can not be packaged
-> dglm2 <- estimateDisp(dglm, design, robust=TRUE)
-> summary(dglm2$tagwise.dispersion)
- Min. 1st Qu. Median Mean 3rd Qu. Max.
-- 0.1766 0.1789 0.1814 0.1846 0.1870 0.2119
+- 0.1423 0.1605 0.1783 0.1867 0.2031 0.2740
->
> # Continuous trend
> nlibs <- 3
--
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