[med-svn] [abacas] 01/01: Added references to registries, short description

Steffen Möller moeller at moszumanska.debian.org
Mon Sep 25 12:16:19 UTC 2017


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moeller pushed a commit to branch master
in repository abacas.

commit a6ed4b709c65e081490085ccae5e1201f69b0941
Author: Steffen Moeller <moeller at debian.org>
Date:   Mon Sep 25 14:14:29 2017 +0200

    Added references to registries, short description
---
 debian/changelog         |  9 +++++++++
 debian/control           | 11 +++++++----
 debian/upstream/metadata | 14 ++++++++++++--
 3 files changed, 28 insertions(+), 6 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 791fd50..d0c0699 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,12 @@
+abacas (1.3.1-5) UNRELEASED; urgency=medium
+
+  * debian/upstream/metadata:
+    - References to registries
+    - yamllint clean
+  * debian/control: improved description
+
+ -- Steffen Moeller <moeller at debian.org>  Mon, 25 Sep 2017 14:13:16 +0200
+
 abacas (1.3.1-4) unstable; urgency=medium
 
   [ Steffen Moeller ]
diff --git a/debian/control b/debian/control
index 283708f..e4fca86 100644
--- a/debian/control
+++ b/debian/control
@@ -14,10 +14,13 @@ Architecture: all
 Depends: ${perl:Depends},
          ${misc:Depends},
          mummer
-Description: Algorithm Based Automatic Contiguation of Assembled Sequences
- ABACAS is intended to rapidly contiguate (align, order, orientate),
- visualize and design primers to close gaps on shotgun assembled contigs
- based on a reference sequence.
+Recommends:
+         primer3
+Description: close gaps in genomic alignments from short reads
+ ABACAS (Algorithm Based Automatic Contiguation of Assembled Sequences)
+ intends to rapidly contiguate (align, order, orientate), visualize and
+ design primers to close gaps on shotgun assembled contigs based on a
+ reference sequence.
  .
  ABACAS uses MUMmer to find alignment positions and identify syntenies
  of assembled contigs against the reference. The output is then processed
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
index 9e661a9..908f86c 100644
--- a/debian/upstream/metadata
+++ b/debian/upstream/metadata
@@ -1,5 +1,7 @@
 Reference:
-  Author: Samuel Assefa and Thomas M. Keane and Thomas D. Otto and Chris Newbold and Matthew Berriman
+  Author: >
+    Samuel Assefa and Thomas M. Keane and Thomas D. Otto and Chris
+    Newbold and Matthew Berriman
   Title: "ABACAS: algorithm-based automatic contiguation of assembled sequences"
   Journal: Bioinformatics
   Year: 2009
@@ -9,4 +11,12 @@ Reference:
   DOI: 10.1093/bioinformatics/btp347
   PMID: 19497936
   URL: http://bioinformatics.oxfordjournals.org/content/25/15/1968
-  eprint: http://bioinformatics.oxfordjournals.org/content/25/15/1968.full.pdf+html
+  eprint: "http://bioinformatics.oxfordjournals.org/content/\
+    25/15/1968.full.pdf+html"
+Registry:
+  - Name: bio.tools
+    Entry: NA
+  - Name: OMICtools
+    Entry: OMICS_06933
+  - Name: SciCrunch
+    Entry: NA

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