[med-svn] [physamp] 01/01: Created upstream/metadata, shortened one-line desc
Steffen Möller
moeller at moszumanska.debian.org
Mon Sep 25 12:46:51 UTC 2017
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moeller pushed a commit to branch master
in repository physamp.
commit 262541df6ccf3f942dc1af2fbbeaf8a6224090ac
Author: Steffen Moeller <moeller at debian.org>
Date: Mon Sep 25 14:46:29 2017 +0200
Created upstream/metadata, shortened one-line desc
---
debian/changelog | 9 +++++++++
debian/control | 2 +-
debian/upstream/metadata | 21 +++++++++++++++++++++
3 files changed, 31 insertions(+), 1 deletion(-)
diff --git a/debian/changelog b/debian/changelog
index 69882b2..afa7842 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,12 @@
+physamp (1.0.3-2) UNRELEASED; urgency=medium
+
+ * shortened single line description
+ * debian/upstream/metadata:
+ - reference to paper
+ - stated that there are no entries in catalogs
+
+ -- Steffen Moeller <moeller at debian.org> Mon, 25 Sep 2017 14:46:05 +0200
+
physamp (1.0.3-1) unstable; urgency=medium
* New upstream version
diff --git a/debian/control b/debian/control
index 3a3d098..4de0876 100644
--- a/debian/control
+++ b/debian/control
@@ -19,7 +19,7 @@ Depends: ${shlibs:Depends},
${misc:Depends}
Breaks: bppsuite (<< 2.3.0-1)
Replaces: bppsuite (<< 2.3.0-1)
-Description: sample sequence alignment according to its corresponding phylogenetic tree
+Description: sample sequence alignment corresponding to phylogeny
The PhySamp package currently contains two programs: bppphysamp, which
samples sequences according to their similarity, and bppalnoptim, which
samples a sequence alignment by removing sequences in order to maximize
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
new file mode 100644
index 0000000..4915d28
--- /dev/null
+++ b/debian/upstream/metadata
@@ -0,0 +1,21 @@
+Reference:
+ Author: Julien Y. Dutheil and Emeric Figuet
+ Title: >
+ Optimization of sequence alignments according to the number of sequences
+ vs. number of sites trade-off
+ Journal: BMC Bioinformatics
+ Month: 6
+ Year: 2015
+ DOI: 10.1186/s12859-015-0619-8
+ PMID: 26055961
+ URL: "https://bmcbioinformatics.biomedcentral.com/articles/\
+ 10.1186/s12859-015-0619-8"
+ eprint: "https://bmcbioinformatics.biomedcentral.com/track/pdf/\
+ 10.1186/s12859-015-0619-8?site=bmcbioinformatics.biomedcentral.com"
+Registry:
+ - Name: OMICtools
+ Entry: NA
+ - Name: bio.tools
+ Entry: NA
+ - Name: SciCrunch
+ Entry: NA
--
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