[med-svn] [bedtools] 02/03: Add back a "cruft" file deleted by mistake.

[Charles Plessy]

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plessy pushed a commit to branch master
in repository bedtools.

commit af3104fa7803ae5ca281dc5bce26348c6d863658
Author: Charles Plessy <plessy at debian.org>
Date:   Mon Sep 25 23:07:00 2017 +0900

    Add back a "cruft" file deleted by mistake.
    
    The absence of this file causes an error when applying the patch "v2.26.0-19-g6bf23c4.patch".
---
 src/utils/FileRecordTools/FileReaders/Makefile~ | 41 +++++++++++++++++++++++++
 1 file changed, 41 insertions(+)

diff --git a/src/utils/FileRecordTools/FileReaders/Makefile~ b/src/utils/FileRecordTools/FileReaders/Makefile~
new file mode 100644
index 0000000..556c7f5
--- /dev/null
+++ b/src/utils/FileRecordTools/FileReaders/Makefile~
@@ -0,0 +1,41 @@
+OBJ_DIR = ../../../../obj/
+BIN_DIR = ../../../../bin/
+UTILITIES_DIR = ../../../utils/
+# -------------------
+# define our includes
+# -------------------
+INCLUDES = -I$(UTILITIES_DIR)/BamTools/include/ \
+			-I$(UTILITIES_DIR)/BamTools/src/ \
+			-I$(UTILITIES_DIR)/fileType/ \
+			 -I$(UTILITIES_DIR)/Contexts/ \
+			-I$(UTILITIES_DIR)/GenomeFile/ \
+			-I$(UTILITIES_DIR)/general/ \
+			-I$(UTILITIES_DIR)/gzstream/ \
+           -I$(UTILITIES_DIR)/version/
+			
+
+# ----------------------------------
+# define our source and object files
+# ----------------------------------
+SOURCES= FileReader.h FileReader.cpp SingleLineDelimTransferBuffer.h SingleLineDelimTransferBuffer.cpp \
+		SingleLineDelimTextFileReader.h SingleLineDelimTextFileReader.cpp BamFileReader.h BamFileReader.cpp \
+		BufferedStreamMgr.h BufferedStreamMgr.cpp InputStreamMgr.h InputStreamMgr.cpp
+OBJECTS= FileReader.o SingleLineDelimTransferBuffer.o SingleLineDelimTextFileReader.o BamFileReader.o BufferedStreamMgr.o InputStreamMgr.o 
+_EXT_OBJECTS=ParseTools.o QuickString.o CompressionTools.o
+EXT_OBJECTS=$(patsubst %,$(OBJ_DIR)/%,$(_EXT_OBJECTS))
+BUILT_OBJECTS= $(patsubst %,$(OBJ_DIR)/%,$(OBJECTS))
+
+all: $(BUILT_OBJECTS)
+
+.PHONY: all
+
+$(BUILT_OBJECTS): $(SOURCES)
+	@echo "  * compiling" $(*F).cpp
+	@$(CXX) -c -o $@ $(*F).cpp $(LDFLAGS) $(CXXFLAGS) $(CPPFLAGS) $(INCLUDES)
+
+clean:
+	@echo "Cleaning up."
+	@rm -f $(OBJ_DIR)/FileReader.o $(OBJ_DIR)SingleLineDelimTransferBuffer $(OBJ_DIR)/SingleLineDelimTextFileReader.o \
+			$(OBJ_DIR)/BinaryFileReader.o $(OBJ_DIR)/BamFileReader.o $(OBJ_DIR)/BufferedStreamMgr.o $(OBJ_DIR)/InputStreamMgr.o $(OBJ_DIR)/PushBackGzStream.o
+
+.PHONY: clean

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