[med-svn] [r-bioc-limma] 02/03: Updated version 3.32.7+dfsg from 'upstream/3.32.7+dfsg'

[Steffen Möller]

This is an automated email from the git hooks/post-receive script.

moeller pushed a commit to branch master
in repository r-bioc-limma.

commit 6d0b0300611e6f0373a2742bcf3212da1c527dd0
Merge: b05eada 0ca9553
Author: Steffen Moeller <moeller at debian.org>
Date:   Mon Sep 25 23:04:00 2017 +0200

    Updated version 3.32.7+dfsg from 'upstream/3.32.7+dfsg'
    
    with Debian dir 6d0a9ad5b1226032cd0e4ba6461a8c076fc25de2

 DESCRIPTION                 |   6 +-
 NAMESPACE                   |   8 +--
 R/alias2Symbol.R            |  30 ++++++++
 R/barcodeplot.R             |  22 +++---
 R/classes.R                 |   8 +--
 R/diffSplice.R              |   8 ++-
 R/fitFDist.R                |  42 +++++++----
 R/geneset-camera.R          |   4 +-
 R/geneset-cameraPR.R        |  89 +++++++++++++++++++++++
 R/geneset-fry.R             |   2 +-
 R/geneset-roast.R           |   1 -
 R/kegga.R                   | 171 +++++++++++++++++++++++---------------------
 R/plotWithHighlights.R      |   5 +-
 R/plots-fit.R               |  66 ++++++++++-------
 R/read.idat.R               |  35 ++++++---
 R/toptable.R                |   4 +-
 R/wsva.R                    |  42 +++++++++++
 build/vignette.rds          | Bin 230 -> 231 bytes
 inst/NEWS.Rd                |  97 +++++++++++++++++++++++++
 inst/doc/changelog.txt      | 150 +++++++++++++++++++++++++++++++++++---
 inst/doc/intro.pdf          | Bin 43301 -> 43301 bytes
 man/08Tests.Rd              |   4 +-
 man/alias2Symbol.Rd         |  18 +++--
 man/barcodeplot.Rd          |  19 ++---
 man/camera.Rd               |  17 +++--
 man/coolmap.Rd              |   6 +-
 man/detectionPValue.Rd      |   4 +-
 man/dim.Rd                  |   7 --
 man/ebayes.Rd               |   2 +-
 man/geneSetTest.Rd          |  10 +--
 man/goana.Rd                |  28 ++++++--
 man/kooperberg.Rd           |   4 +-
 man/plotSA.Rd               |  25 ++++---
 man/plotWithHighlights.Rd   |   2 +-
 man/propTrueNull.Rd         |   3 +-
 man/propexpr.Rd             |   4 +-
 man/volcanoplot.Rd          |  20 +++---
 man/wsva.Rd                 |  40 +++++++++++
 src/init.c                  |  32 +++++++++
 tests/limma-Tests.R         |   4 ++
 tests/limma-Tests.Rout.save | 131 ++++++++++++++++++---------------
 41 files changed, 874 insertions(+), 296 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-bioc-limma.git