[med-svn] [Git][med-team/subread][master] 6 commits: New upstream version 1.6.1+dfsg

[Alexandre Mestiashvili]

Alexandre Mestiashvili pushed to branch master at Debian Med / subread


Commits:
9c61fb61 by Alexandre Mestiashvili at 2018-04-04T16:50:35+00:00
New upstream version 1.6.1+dfsg
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6cf49bb5 by Alexandre Mestiashvili at 2018-04-04T16:51:19+00:00
Update upstream source from tag 'upstream/1.6.1+dfsg'

Update to upstream version '1.6.1+dfsg'
with Debian dir 354b3a71da1fc74764ff9f1c4305fe55cfae8140
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9916f97e by Alexandre Mestiashvili at 2018-04-04T16:54:39+00:00
Update d/control, bump Policy to 4.1.3, fix Vcs-* fields to point to salsa

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829e5a04 by Alexandre Mestiashvili at 2018-04-04T17:01:17+00:00
Refresh patches

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f42e1934 by Alexandre Mestiashvili at 2018-04-04T17:04:51+00:00
Update copyright years

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6cc3e31d by Alexandre Mestiashvili at 2018-04-04T19:15:40+02:00
Update changelog, prepare for release

Gbp-Dch: Ignore

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24 changed files:

- debian/changelog
- debian/control
- debian/copyright
- debian/patches/arch_specific_flags.patch
- debian/patches/fix_ftbfs_kfreebsd.patch
- debian/patches/typo.patch
- doc/SubreadUsersGuide.tex
- src/HelperFunctions.c
- src/Makefile.FreeBSD
- src/Makefile.Linux
- src/Makefile.MacOS
- src/SNPCalling.c
- src/SUBindel.c
- src/build-sam-index.c
- src/core-indel.c
- src/core-interface-aligner.c
- src/core-interface-subjunc.c
- src/core-junction.c
- src/core-junction.h
- src/core.c
- src/core.h
- src/coverage_calc.c
- + src/detection-calls.c
- src/gene-algorithms.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/subread/compare/27f92f1a09fc1f774ba60579de3224bb881b231b...6cc3e31d4d989c659630cce5f634b36779251bce

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View it on GitLab: https://salsa.debian.org/med-team/subread/compare/27f92f1a09fc1f774ba60579de3224bb881b231b...6cc3e31d4d989c659630cce5f634b36779251bce
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