[med-svn] [Git][med-team/unicycler][master] 2 commits: Use free pilon, sneak in symlink for dynamic lib

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / unicycler


Commits:
e107f105 by Andreas Tille at 2018-08-03T08:06:16Z
Use free pilon, sneak in symlink for dynamic lib

- - - - -
85df4688 by Andreas Tille at 2018-08-03T08:26:34Z
Mention work that is left to do

- - - - -


2 changed files:

- debian/control
- debian/rules


Changes:

=====================================
debian/control
=====================================
--- a/debian/control
+++ b/debian/control
@@ -11,7 +11,7 @@ Build-Depends: debhelper (>= 11~),
                bowtie2,
                freebayes,
                ncbi-blast+,
-               pilon | pilon-non-free,
+               pilon,
                racon,
                samtools,
                spades,


=====================================
debian/rules
=====================================
--- a/debian/rules
+++ b/debian/rules
@@ -36,4 +36,8 @@ override_dh_auto_test:
 override_dh_link:
 	dh_link
 	# symlink versioned shared lib to make it found
-	ln -s `basename $$(find debian -name "cpp_functions*.so")` `dirname $$(find debian -name "cpp_functions*.so")`/cpp_functions.so
+	# FIXME: actually the cpp_functions*.so libs for different Python3 versions are identical!
+	#        This should be checked and normalised
+	for pyldir in `dirname $$(find debian -name "cpp_functions*.so") | sort` ; do \
+	    ln -s `basename $$(find debian -name "cpp_functions*.so")` $${pyldir}/cpp_functions.so ; \
+	done



View it on GitLab: https://salsa.debian.org/med-team/unicycler/compare/bbc12f16fa57fb43a8eb809517cfb36ba4e041b9...85df46881a9de2a5e19441d64c9be41387bc1228

-- 
View it on GitLab: https://salsa.debian.org/med-team/unicycler/compare/bbc12f16fa57fb43a8eb809517cfb36ba4e041b9...85df46881a9de2a5e19441d64c9be41387bc1228
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