[med-svn] [Git][med-team/circlator][master] 4 commits: debhelper 11

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / circlator


Commits:
8025ee41 by Andreas Tille at 2018-12-03T07:15:39Z
debhelper 11

- - - - -
62436fdf by Andreas Tille at 2018-12-03T07:18:03Z
Point Vcs fields to salsa.debian.org

- - - - -
99b3691c by Andreas Tille at 2018-12-03T07:18:03Z
Standards-Version: 4.2.1

- - - - -
525fbc04 by Andreas Tille at 2018-12-03T07:18:23Z
Respect DEB_BUILD_OPTIONS in override_dh_auto_test target

- - - - -


4 changed files:

- debian/changelog
- debian/compat
- debian/control
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+circlator (1.5.5-2) UNRELEASED; urgency=medium
+
+  * Team upload.
+  * debhelper 11
+  * Point Vcs fields to salsa.debian.org
+  * Standards-Version: 4.2.1
+  * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
+
+ -- Andreas Tille <tille at debian.org>  Mon, 03 Dec 2018 08:15:39 +0100
+
 circlator (1.5.5-1) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/compat
=====================================
@@ -1 +1 @@
-10
+11


=====================================
debian/control
=====================================
@@ -1,39 +1,37 @@
 Source: circlator
-Section: science
-Priority: optional
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Afif Elghraoui <afif at debian.org>
-Build-Depends:
-	debhelper (>= 10),
-	dh-python,
-	python3-all,
-	python3-setuptools,
-	python3-openpyxl,
-	python3-jdcal,
-	fastaq (>= 3.12.1),
-	python3-pysam (>= 0.8.1),
-	python3-pymummer (>= 0.9.0),
+Section: science
+Priority: optional
+Build-Depends: debhelper (>= 11~),
+               dh-python,
+               python3-all,
+               python3-setuptools,
+               python3-openpyxl,
+               python3-jdcal,
+               fastaq (>= 3.12.1),
+               python3-pysam,
+               python3-pymummer,
 # Test-Depends:
-	python3-nose,
-	spades,
-	bwa (>= 0.7.12),
-	prodigal,
-    canu
-Standards-Version: 4.1.3
+               python3-nose,
+               spades,
+               bwa (>= 0.7.12),
+               prodigal,
+               canu
+Standards-Version: 4.2.1
+Vcs-Browser: https://salsa.debian.org/med-team/circlator
+Vcs-Git: https://salsa.debian.org/med-team/circlator.git
 Homepage: http://sanger-pathogens.github.io/circlator/
-Vcs-Git: https://anonscm.debian.org/git/debian-med/circlator.git
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/circlator.git
 
 Package: circlator
 Architecture: all
-Depends:
-	${misc:Depends},
-	${python3:Depends},
-	prodigal,
-	bwa (>= 0.7.12),
-	mummer,
-	samtools,
-	spades
+Depends: ${misc:Depends},
+         ${python3:Depends},
+         prodigal,
+         bwa (>= 0.7.12),
+         mummer,
+         samtools,
+         spades
 Suggests: canu
 Description: circularize genome assemblies
  Circlator is a tool to automate assembly circularization for bacterial and


=====================================
debian/rules
=====================================
@@ -9,4 +9,6 @@ export LC_ALL=C.UTF-8
 	dh $@ --with python3 --buildsystem=pybuild
 
 override_dh_auto_test:
+ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
 	PYTHONPATH=$(CURDIR) nosetests3 -v --where=circlator/tests
+endif



View it on GitLab: https://salsa.debian.org/med-team/circlator/compare/834e1edfaf36eb88b5d3443093d98af607493e9c...525fbc0428aafe5dae1fc5687a1ec0d270520a1d

-- 
View it on GitLab: https://salsa.debian.org/med-team/circlator/compare/834e1edfaf36eb88b5d3443093d98af607493e9c...525fbc0428aafe5dae1fc5687a1ec0d270520a1d
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20181203/5196f962/attachment-0001.html>