[med-svn] [Git][med-team/htslib][master] 2 commits: Add libdeflate for DEFLATE based (de)compression and its crc32 implementation.

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / htslib


Commits:
bc33ca5a by Michael R. Crusoe at 2018-12-05T04:46:14Z
Add libdeflate for DEFLATE based (de)compression and its crc32 implementation.

- - - - -
81e1ecba by Michael R. Crusoe at 2018-12-05T04:56:22Z
Re-add mipsel to tabix & libhts-dev as well. (Closes: #915404)

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+htslib (1.9-5) unstable; urgency=medium
+
+  * Add libdeflate for DEFLATE based (de)compression and its crc32
+    implementation.
+  * Re-add mipsel to tabix & libhts-dev as well. (Closes: #915404)
+
+ -- Michael R. Crusoe <michael.crusoe at gmail.com>  Tue, 04 Dec 2018 20:56:12 -0800
+
 htslib (1.9-4) unstable; urgency=medium
 
   * Add Breaks: python-pysam (<< 0.15~), python3-pysam (<< 0.15~)


=====================================
debian/control
=====================================
@@ -11,7 +11,8 @@ Build-Depends: debhelper (>= 11~),
                libcurl4-gnutls-dev,
                liblzma-dev,
                libssl-dev,
-               zlib1g-dev
+               zlib1g-dev,
+	       libdeflate-dev
 Standards-Version: 4.2.1
 Vcs-Browser: https://salsa.debian.org/med-team/htslib
 Vcs-Git: https://salsa.debian.org/med-team/htslib.git
@@ -37,7 +38,7 @@ Description: C library for high-throughput sequencing data formats
  new index and then for the old if the new index is absent.
 
 Package: libhts-dev
-Architecture: amd64 arm64 armel armhf mips mips64el ppc64el s390x alpha hppa ia64 kfreebsd-amd64 m68k powerpc powerpcspe ppc64 riscv64 sh4 sparc64 x32
+Architecture: amd64 arm64 armel armhf mips mips64el mipsel ppc64el s390x alpha hppa ia64 kfreebsd-amd64 m68k powerpc powerpcspe ppc64 riscv64 sh4 sparc64 x32
 Multi-Arch: same
 Section: libdevel
 Depends: libhts2 (= ${binary:Version}),
@@ -97,7 +98,7 @@ Description: Test data for HTSlib
  This package contains test files and scripts for the HTSlib.
 
 Package: tabix
-Architecture: amd64 arm64 armel armhf mips mips64el ppc64el s390x alpha hppa ia64 kfreebsd-amd64 m68k powerpc powerpcspe ppc64 riscv64 sh4 sparc64 x32
+Architecture: amd64 arm64 armel armhf mips mips64el mipsel ppc64el s390x alpha hppa ia64 kfreebsd-amd64 m68k powerpc powerpcspe ppc64 riscv64 sh4 sparc64 x32
 Depends: ${misc:Depends},
          ${shlibs:Depends}
 Description: generic indexer for TAB-delimited genome position files


=====================================
debian/rules
=====================================
@@ -20,7 +20,7 @@ override_dh_auto_configure:
 	# create clean copy of test dir
 	cp -a test test_backup
 	autoconf
-	dh_auto_configure -- --enable-libcurl
+	dh_auto_configure -- --enable-libcurl --enable-gcs --enable-s3
 
 override_dh_auto_build:
 	dh_auto_build -- \



View it on GitLab: https://salsa.debian.org/med-team/htslib/compare/47eee749bf3f26002b56a26681ad93a895270d13...81e1ecba421cf8144072fc212f8efa5b97844a0a

-- 
View it on GitLab: https://salsa.debian.org/med-team/htslib/compare/47eee749bf3f26002b56a26681ad93a895270d13...81e1ecba421cf8144072fc212f8efa5b97844a0a
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