[med-svn] [Git][med-team/rapmap][master] 2 commits: Add TODO about spdlog code copy
Andreas Tille
gitlab at salsa.debian.org
Thu Dec 13 09:14:05 GMT 2018
Andreas Tille pushed to branch master at Debian Med / rapmap
Commits:
7243a997 by Andreas Tille at 2018-12-13T07:23:34Z
Add TODO about spdlog code copy
- - - - -
203ed6e5 by Andreas Tille at 2018-12-13T09:13:39Z
More missing headers for salmon
- - - - -
3 changed files:
- + debian/TODO
- debian/changelog
- debian/rapmap-dev.install
Changes:
=====================================
debian/TODO
=====================================
@@ -0,0 +1,4 @@
+Replace code copy of spdlog by Debian packaged version once either
+upstream might have switched (see
+ https://github.com/COMBINE-lab/RapMap/issues/44
+) or we can develop a patch to adapt RapMap code to Debian spdlog.
=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+rapmap (0.12.0+dfsg-2) UNRELEASED; urgency=medium
+
+ * Add further header files to rapmap-dev since these are used in salmon
+
+ -- Andreas Tille <tille at debian.org> Wed, 12 Dec 2018 23:15:17 +0100
+
rapmap (0.12.0+dfsg-1) unstable; urgency=medium
* New upstream version
=====================================
debian/rapmap-dev.install
=====================================
@@ -6,16 +6,23 @@ src/RapMapSAIndex.cpp usr/share/rapmap/src
src/RapMapSAIndexer.cpp usr/share/rapmap/src
src/RapMapUtils.cpp usr/share/rapmap/src
+include/bit_*.h usr/include/rapmap
include/kseq.h usr/include/rapmap
include/macros.h usr/include/rapmap
include/rank9b.h usr/include/rapmap
-include/chobo/small_vector.hpp usr/include/chobo
+include/chobo/small_vector.hpp usr/include/rapmap/chobo
include/sparsepp/spp.h usr/include/rapmap/sparsepp
include/sparsepp/spp_config.h usr/include/rapmap/sparsepp
include/sparsepp/spp_stdint.h usr/include/rapmap/sparsepp
include/sparsepp/spp_traits.h usr/include/rapmap/sparsepp
include/sparsepp/spp_utils.h usr/include/rapmap/sparsepp
+include/Boo*.hpp usr/include/rapmap
+include/FrugalBooMap.hpp usr/include/rapmap
+include/IndexHeader.hpp usr/include/rapmap
include/Kmer.hpp usr/include/rapmap
+include/RapMapConfig.hpp usr/include/rapmap
include/RapMapFileSystem.hpp usr/include/rapmap
+include/RapMapSAIndex.hpp usr/include/rapmap
include/RapMapUtils.hpp usr/include/rapmap
include/SparseHashSerializer.hpp usr/include/rapmap
+include/SpinLock.hpp usr/include/rapmap
View it on GitLab: https://salsa.debian.org/med-team/rapmap/compare/f50b9d72962e0ccad8e35d0942890cfd1ad65015...203ed6e583851f1eda3ad537d70dba73e4a81bde
--
View it on GitLab: https://salsa.debian.org/med-team/rapmap/compare/f50b9d72962e0ccad8e35d0942890cfd1ad65015...203ed6e583851f1eda3ad537d70dba73e4a81bde
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