[med-svn] [Git][med-team/gatb-core][master] 5 commits: Make sure target dir exists also for Architecture: all build

Andreas Tille gitlab at salsa.debian.org
Sat Dec 15 10:47:55 GMT 2018 

Andreas Tille pushed to branch master at Debian Med / gatb-core


Commits:
def2b414 by Andreas Tille at 2018-12-15T09:22:08Z
Make sure target dir exists also for Architecture: all build

- - - - -
d0df667c by Andreas Tille at 2018-12-15T09:22:39Z
Standards-Version: 4.2.1

- - - - -
323094e8 by Andreas Tille at 2018-12-15T09:22:40Z
Remove trailing whitespace in debian/changelog

- - - - -
9c0f259e by Andreas Tille at 2018-12-15T09:22:40Z
Remove trailing whitespace in debian/control

- - - - -
cf9e2de9 by Andreas Tille at 2018-12-15T10:47:35Z
Upload to unstable

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+gatb-core (1.4.1+dfsg-3) unstable; urgency=medium
+
+  * Make sure target dir exists also for Architecture: all build
+    Closes: #903613
+  * Standards-Version: 4.2.1
+  * Remove trailing whitespace in debian/changelog
+  * Remove trailing whitespace in debian/control
+
+ -- Andreas Tille <tille at debian.org>  Sat, 15 Dec 2018 10:22:40 +0100
+
 gatb-core (1.4.1+dfsg-2) unstable; urgency=medium
 
   * Install cmake files
@@ -8,6 +18,6 @@ gatb-core (1.4.1+dfsg-2) unstable; urgency=medium
 
 gatb-core (1.4.1+dfsg-1) unstable; urgency=medium
 
-  * Initial release (Closes: #873044)  
+  * Initial release (Closes: #873044)
 
  -- Andreas Tille <tille at debian.org>  Mon, 14 May 2018 21:57:34 +0200


=====================================
debian/control
=====================================
@@ -13,7 +13,7 @@ Build-Depends: debhelper (>= 11~),
                libjsoncpp-dev,
                doxygen,
                graphviz
-Standards-Version: 4.1.4
+Standards-Version: 4.2.1
 Vcs-Browser: https://salsa.debian.org/med-team/gatb-core
 Vcs-Git: https://salsa.debian.org/med-team/gatb-core.git
 Homepage: https://github.com/GATB/gatb-core
@@ -23,16 +23,16 @@ Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends}
 Description: Genome Analysis Toolbox with de-Bruijn graph
- The GATB-CORE project provides a set of highly efficient 
- algorithms to analyse NGS data sets. These methods enable 
+ The GATB-CORE project provides a set of highly efficient
+ algorithms to analyse NGS data sets. These methods enable
  the analysis of data sets of any size on multi-core desktop
  computers, including very huge amount of reads data coming
- from any kind of organisms such as bacteria, plants, 
- animals and even complex samples (e.g. metagenomes). 
- Read more about GATB at https://gatb.inria.fr/. 
- By itself GATB-CORE is not an NGS data analysis tool. 
- However, it can be used to create such tools. There already 
- exist a set of ready-to-use tools relying on GATB-CORE 
+ from any kind of organisms such as bacteria, plants,
+ animals and even complex samples (e.g. metagenomes).
+ Read more about GATB at https://gatb.inria.fr/.
+ By itself GATB-CORE is not an NGS data analysis tool.
+ However, it can be used to create such tools. There already
+ exist a set of ready-to-use tools relying on GATB-CORE
  library: see https://gatb.inria.fr/software/
 
 Package: libgatbcore0
@@ -41,16 +41,16 @@ Section: libs
 Depends: ${shlibs:Depends},
          ${misc:Depends}
 Description: dynamic library of the Genome Analysis Toolbox
- The GATB-CORE project provides a set of highly efficient 
- algorithms to analyse NGS data sets. These methods enable 
+ The GATB-CORE project provides a set of highly efficient
+ algorithms to analyse NGS data sets. These methods enable
  the analysis of data sets of any size on multi-core desktop
  computers, including very huge amount of reads data coming
- from any kind of organisms such as bacteria, plants, 
- animals and even complex samples (e.g. metagenomes). 
- Read more about GATB at https://gatb.inria.fr/. 
- By itself GATB-CORE is not an NGS data analysis tool. 
- However, it can be used to create such tools. There already 
- exist a set of ready-to-use tools relying on GATB-CORE 
+ from any kind of organisms such as bacteria, plants,
+ animals and even complex samples (e.g. metagenomes).
+ Read more about GATB at https://gatb.inria.fr/.
+ By itself GATB-CORE is not an NGS data analysis tool.
+ However, it can be used to create such tools. There already
+ exist a set of ready-to-use tools relying on GATB-CORE
  library: see https://gatb.inria.fr/software/
  .
  This package contains the dynamic library.
@@ -62,16 +62,16 @@ Depends: ${shlibs:Depends},
          ${misc:Depends},
          libgatbcore0 (= ${binary:Version})
 Description: development library of the Genome Analysis Toolbox
- The GATB-CORE project provides a set of highly efficient 
- algorithms to analyse NGS data sets. These methods enable 
+ The GATB-CORE project provides a set of highly efficient
+ algorithms to analyse NGS data sets. These methods enable
  the analysis of data sets of any size on multi-core desktop
  computers, including very huge amount of reads data coming
- from any kind of organisms such as bacteria, plants, 
- animals and even complex samples (e.g. metagenomes). 
- Read more about GATB at https://gatb.inria.fr/. 
- By itself GATB-CORE is not an NGS data analysis tool. 
- However, it can be used to create such tools. There already 
- exist a set of ready-to-use tools relying on GATB-CORE 
+ from any kind of organisms such as bacteria, plants,
+ animals and even complex samples (e.g. metagenomes).
+ Read more about GATB at https://gatb.inria.fr/.
+ By itself GATB-CORE is not an NGS data analysis tool.
+ However, it can be used to create such tools. There already
+ exist a set of ready-to-use tools relying on GATB-CORE
  library: see https://gatb.inria.fr/software/
  .
  This package contains the static library and the header files
@@ -83,16 +83,16 @@ Depends: ${shlibs:Depends},
          ${misc:Depends},
          gatb-core
 Description: Genome Analysis Toolbox with de-Bruijn graph (test data)
- The GATB-CORE project provides a set of highly efficient 
- algorithms to analyse NGS data sets. These methods enable 
+ The GATB-CORE project provides a set of highly efficient
+ algorithms to analyse NGS data sets. These methods enable
  the analysis of data sets of any size on multi-core desktop
  computers, including very huge amount of reads data coming
- from any kind of organisms such as bacteria, plants, 
- animals and even complex samples (e.g. metagenomes). 
- Read more about GATB at https://gatb.inria.fr/. 
- By itself GATB-CORE is not an NGS data analysis tool. 
- However, it can be used to create such tools. There already 
- exist a set of ready-to-use tools relying on GATB-CORE 
+ from any kind of organisms such as bacteria, plants,
+ animals and even complex samples (e.g. metagenomes).
+ Read more about GATB at https://gatb.inria.fr/.
+ By itself GATB-CORE is not an NGS data analysis tool.
+ However, it can be used to create such tools. There already
+ exist a set of ready-to-use tools relying on GATB-CORE
  library: see https://gatb.inria.fr/software/
  .
  This package contains some data to test the library.


=====================================
debian/rules
=====================================
@@ -9,6 +9,12 @@ pkgtestdata=$(DEB_SOURCE)-testdata
 %:
 	dh $@ --sourcedirectory=gatb-core
 
+override_dh_auto_build-arch:
+	dh_auto_build -a
+
+override_dh_auto_build-indep:
+	echo "Save time of autobuilders and do nothing ... unfortunately this does not seem to work"
+
 override_dh_install-arch:
 	dh_install -a
 	d-shlibmove --commit \
@@ -22,4 +28,5 @@ override_dh_install-arch:
 
 override_dh_install-indep:
 	dh_install -i
+	mkdir -p debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE)
 	mv debian/$(pkgtestdata)/usr/share/doc/$(DEB_SOURCE)/test/gatb-core-cppunit debian/$(DEB_SOURCE)/usr/lib/$(DEB_SOURCE)



View it on GitLab: https://salsa.debian.org/med-team/gatb-core/compare/679a1207ff9fcfcc43be62511f3b61697bac0fc5...cf9e2de9e5936b2660563f17cc5417a3528119b1

-- 
View it on GitLab: https://salsa.debian.org/med-team/gatb-core/compare/679a1207ff9fcfcc43be62511f3b61697bac0fc5...cf9e2de9e5936b2660563f17cc5417a3528119b1
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