[med-svn] [mcl] branch master updated (9a16741 -> efaab32)
Andreas Tille
tille at debian.org
Mon Jan 22 11:04:27 UTC 2018
This is an automated email from the git hooks/post-receive script.
tille pushed a change to branch master
in repository mcl.
from 9a16741 Upload to unstable
new ad32399 Do not save copies of docs in d/rules
new e4a95b6 Remove files from upstream tarball which will be recreated and prevent building the package twice in a row
new cc86e81 New upstream version 14-137+ds
new 96db8e5 Update upstream source from tag 'upstream/14-137+ds'
new ceec8a2 Adapt patches to file removal
new e35e2ba New upstream version 14-137+ds
new 215428b Update upstream source from tag 'upstream/14-137+ds'
new efaab32 Remove generated files in clean target
The 8 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile.in | 704 ---------
debian/changelog | 9 +
debian/copyright | 4 +
debian/patches/series | 1 -
debian/patches/spelling.patch | 328 -----
debian/rules | 19 +-
debian/watch | 3 +-
doc/Makefile.in | 804 ----------
doc/clm.1 | 147 --
doc/clm.html | 226 ---
doc/clm.ps | 349 -----
doc/clmclose.1 | 144 --
doc/clmclose.html | 226 ---
doc/clmclose.ps | 366 -----
doc/clmdist.1 | 409 ------
doc/clmdist.html | 454 ------
doc/clmdist.ps | 828 -----------
doc/clmformat.1 | 627 --------
doc/clmformat.html | 674 ---------
doc/clmformat.ps | 1039 -------------
doc/clmimac.1 | 120 --
doc/clmimac.html | 214 ---
doc/clmimac.ps | 338 -----
doc/clminfo.1 | 187 ---
doc/clminfo.html | 262 ----
doc/clminfo.ps | 441 ------
doc/clminfo2.1 | 199 ---
doc/clminfo2.html | 264 ----
doc/clminfo2.ps | 426 ------
doc/clmmate.1 | 146 --
doc/clmmate.html | 218 ---
doc/clmmate.ps | 360 -----
doc/clmmeet.1 | 74 -
doc/clmmeet.html | 173 ---
doc/clmmeet.ps | 281 ----
doc/clmoptics.1 | 145 --
doc/clmoptics.html | 218 ---
doc/clmoptics.ps | 376 -----
doc/clmorder.1 | 87 --
doc/clmorder.html | 182 ---
doc/clmorder.ps | 310 ----
doc/clmprotocols.html | 435 ------
doc/clmprotocols.ps | 781 ----------
doc/clmprotocols2.html | 521 -------
doc/clmprotocols2.ps | 744 ----------
doc/clmresidue.1 | 96 --
doc/clmresidue.html | 196 ---
doc/clmresidue.ps | 309 ----
doc/clmvol.1 | 81 -
doc/clmvol.html | 178 ---
doc/clmvol.ps | 294 ----
doc/distindex.html | 199 ---
doc/index.html | 199 ---
doc/mcl.1 | 1569 --------------------
doc/mcl.html | 1522 -------------------
doc/mcl.ps | 2521 --------------------------------
doc/mclblastline.html | 227 ---
doc/mclblastline.ps | 401 -----
doc/mclcm.1 | 337 -----
doc/mclcm.html | 404 -----
doc/mclcm.ps | 655 ---------
doc/mclfamily.html | 245 ----
doc/mclfamily.ps | 306 ----
doc/mclfaq.html | 1487 -------------------
doc/mclfaq.ps | 2299 -----------------------------
doc/mclindex.ps | 300 ----
doc/mclpipeline.1 | 551 -------
doc/mclpipeline.html | 620 --------
doc/mclpipeline.ps | 891 -----------
doc/mcx.1 | 134 --
doc/mcx.html | 219 ---
doc/mcx.ps | 340 -----
doc/mcxalter.1 | 112 --
doc/mcxalter.html | 210 ---
doc/mcxalter.ps | 298 ----
doc/mcxarray.1 | 495 -------
doc/mcxarray.html | 437 ------
doc/mcxarray.ps | 685 ---------
doc/mcxassemble.1 | 560 -------
doc/mcxassemble.html | 522 -------
doc/mcxassemble.ps | 841 -----------
doc/mcxclcf.1 | 157 --
doc/mcxclcf.html | 215 ---
doc/mcxclcf.ps | 357 -----
doc/mcxconvert.1 | 114 --
doc/mcxconvert.html | 209 ---
doc/mcxconvert.ps | 345 -----
doc/mcxctty.1 | 195 ---
doc/mcxctty.html | 253 ----
doc/mcxctty.ps | 411 ------
doc/mcxdeblast.html | 303 ----
doc/mcxdeblast.ps | 452 ------
doc/mcxdiameter.1 | 172 ---
doc/mcxdiameter.html | 224 ---
doc/mcxdiameter.ps | 384 -----
doc/mcxdump.1 | 434 ------
doc/mcxdump.html | 452 ------
doc/mcxdump.ps | 730 ---------
doc/mcxerdos.1 | 173 ---
doc/mcxerdos.html | 260 ----
doc/mcxerdos.ps | 423 ------
doc/mcxi.1 | 349 -----
doc/mcxi.html | 460 ------
doc/mcxi.ps | 680 ---------
doc/mcxio.html | 780 ----------
doc/mcxio.ps | 1172 ---------------
doc/mcxload.1 | 583 --------
doc/mcxload.html | 589 --------
doc/mcxload.ps | 956 ------------
doc/mcxmap.1 | 223 ---
doc/mcxmap.html | 281 ----
doc/mcxmap.ps | 401 -----
doc/mcxquery.1 | 309 ----
doc/mcxquery.html | 372 -----
doc/mcxquery.ps | 588 --------
doc/mcxrand.1 | 236 ---
doc/mcxrand.html | 304 ----
doc/mcxrand.ps | 530 -------
doc/mcxsubs.1 | 605 --------
doc/mcxsubs.html | 682 ---------
doc/mcxsubs.ps | 947 ------------
doc/tingea.log.html | 213 ---
doc/tingea.log.ps | 448 ------
graphs/Makefile.in | 389 -----
img/Makefile.in | 382 -----
include/Makefile.in | 537 -------
scripts/Makefile.in | 405 -----
src/Makefile.in | 534 -------
src/alien/Makefile.in | 535 -------
src/alien/oxygen/Makefile.in | 535 -------
src/alien/oxygen/doc/Makefile.in | 481 ------
src/alien/oxygen/doc/mclblastline.1 | 136 --
src/alien/oxygen/doc/mclblastline.html | 227 ---
src/alien/oxygen/doc/mclblastline.ps | 401 -----
src/alien/oxygen/doc/mcxdeblast.1 | 193 ---
src/alien/oxygen/doc/mcxdeblast.html | 303 ----
src/alien/oxygen/doc/mcxdeblast.ps | 452 ------
src/alien/oxygen/src/Makefile.in | 395 -----
src/clew/Makefile.in | 443 ------
src/gryphon/Makefile.in | 439 ------
src/impala/Makefile.in | 453 ------
src/mcl/Makefile.in | 451 ------
src/shcl/Makefile.in | 609 --------
src/shmcl/Makefile.in | 486 ------
src/shmcx/Makefile.in | 481 ------
src/shmcxquery/Makefile.in | 437 ------
src/shmx/Makefile.in | 639 --------
testing/Makefile.in | 534 -------
testing/blast/Makefile.in | 338 -----
testing/setops/Makefile.in | 338 -----
testing/stream/Makefile.in | 338 -----
util/Makefile.in | 461 ------
152 files changed, 22 insertions(+), 65904 deletions(-)
delete mode 100644 Makefile.in
delete mode 100644 doc/Makefile.in
delete mode 100644 doc/clm.1
delete mode 100644 doc/clm.html
delete mode 100644 doc/clm.ps
delete mode 100644 doc/clmclose.1
delete mode 100644 doc/clmclose.html
delete mode 100644 doc/clmclose.ps
delete mode 100644 doc/clmdist.1
delete mode 100644 doc/clmdist.html
delete mode 100644 doc/clmdist.ps
delete mode 100644 doc/clmformat.1
delete mode 100644 doc/clmformat.html
delete mode 100644 doc/clmformat.ps
delete mode 100644 doc/clmimac.1
delete mode 100644 doc/clmimac.html
delete mode 100644 doc/clmimac.ps
delete mode 100644 doc/clminfo.1
delete mode 100644 doc/clminfo.html
delete mode 100644 doc/clminfo.ps
delete mode 100644 doc/clminfo2.1
delete mode 100644 doc/clminfo2.html
delete mode 100644 doc/clminfo2.ps
delete mode 100644 doc/clmmate.1
delete mode 100644 doc/clmmate.html
delete mode 100644 doc/clmmate.ps
delete mode 100644 doc/clmmeet.1
delete mode 100644 doc/clmmeet.html
delete mode 100644 doc/clmmeet.ps
delete mode 100644 doc/clmoptics.1
delete mode 100644 doc/clmoptics.html
delete mode 100644 doc/clmoptics.ps
delete mode 100644 doc/clmorder.1
delete mode 100644 doc/clmorder.html
delete mode 100644 doc/clmorder.ps
delete mode 100644 doc/clmprotocols.html
delete mode 100644 doc/clmprotocols.ps
delete mode 100644 doc/clmprotocols2.html
delete mode 100644 doc/clmprotocols2.ps
delete mode 100644 doc/clmresidue.1
delete mode 100644 doc/clmresidue.html
delete mode 100644 doc/clmresidue.ps
delete mode 100644 doc/clmvol.1
delete mode 100644 doc/clmvol.html
delete mode 100644 doc/clmvol.ps
delete mode 100644 doc/distindex.html
delete mode 100644 doc/index.html
delete mode 100644 doc/mcl.1
delete mode 100644 doc/mcl.html
delete mode 100644 doc/mcl.ps
delete mode 100644 doc/mclblastline.html
delete mode 100644 doc/mclblastline.ps
delete mode 100644 doc/mclcm.1
delete mode 100644 doc/mclcm.html
delete mode 100644 doc/mclcm.ps
delete mode 100644 doc/mclfamily.html
delete mode 100644 doc/mclfamily.ps
delete mode 100644 doc/mclfaq.html
delete mode 100644 doc/mclfaq.ps
delete mode 100644 doc/mclindex.ps
delete mode 100644 doc/mclpipeline.1
delete mode 100644 doc/mclpipeline.html
delete mode 100644 doc/mclpipeline.ps
delete mode 100644 doc/mcx.1
delete mode 100644 doc/mcx.html
delete mode 100644 doc/mcx.ps
delete mode 100644 doc/mcxalter.1
delete mode 100644 doc/mcxalter.html
delete mode 100644 doc/mcxalter.ps
delete mode 100644 doc/mcxarray.1
delete mode 100644 doc/mcxarray.html
delete mode 100644 doc/mcxarray.ps
delete mode 100644 doc/mcxassemble.1
delete mode 100644 doc/mcxassemble.html
delete mode 100644 doc/mcxassemble.ps
delete mode 100644 doc/mcxclcf.1
delete mode 100644 doc/mcxclcf.html
delete mode 100644 doc/mcxclcf.ps
delete mode 100644 doc/mcxconvert.1
delete mode 100644 doc/mcxconvert.html
delete mode 100644 doc/mcxconvert.ps
delete mode 100644 doc/mcxctty.1
delete mode 100644 doc/mcxctty.html
delete mode 100644 doc/mcxctty.ps
delete mode 100644 doc/mcxdeblast.html
delete mode 100644 doc/mcxdeblast.ps
delete mode 100644 doc/mcxdiameter.1
delete mode 100644 doc/mcxdiameter.html
delete mode 100644 doc/mcxdiameter.ps
delete mode 100644 doc/mcxdump.1
delete mode 100644 doc/mcxdump.html
delete mode 100644 doc/mcxdump.ps
delete mode 100644 doc/mcxerdos.1
delete mode 100644 doc/mcxerdos.html
delete mode 100644 doc/mcxerdos.ps
delete mode 100644 doc/mcxi.1
delete mode 100644 doc/mcxi.html
delete mode 100644 doc/mcxi.ps
delete mode 100644 doc/mcxio.html
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delete mode 100644 doc/mcxload.1
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delete mode 100644 doc/mcxload.ps
delete mode 100644 doc/mcxmap.1
delete mode 100644 doc/mcxmap.html
delete mode 100644 doc/mcxmap.ps
delete mode 100644 doc/mcxquery.1
delete mode 100644 doc/mcxquery.html
delete mode 100644 doc/mcxquery.ps
delete mode 100644 doc/mcxrand.1
delete mode 100644 doc/mcxrand.html
delete mode 100644 doc/mcxrand.ps
delete mode 100644 doc/mcxsubs.1
delete mode 100644 doc/mcxsubs.html
delete mode 100644 doc/mcxsubs.ps
delete mode 100644 doc/tingea.log.html
delete mode 100644 doc/tingea.log.ps
delete mode 100644 graphs/Makefile.in
delete mode 100644 img/Makefile.in
delete mode 100644 include/Makefile.in
delete mode 100644 scripts/Makefile.in
delete mode 100644 src/Makefile.in
delete mode 100644 src/alien/Makefile.in
delete mode 100644 src/alien/oxygen/Makefile.in
delete mode 100644 src/alien/oxygen/doc/Makefile.in
delete mode 100644 src/alien/oxygen/doc/mclblastline.1
delete mode 100644 src/alien/oxygen/doc/mclblastline.html
delete mode 100644 src/alien/oxygen/doc/mclblastline.ps
delete mode 100644 src/alien/oxygen/doc/mcxdeblast.1
delete mode 100644 src/alien/oxygen/doc/mcxdeblast.html
delete mode 100644 src/alien/oxygen/doc/mcxdeblast.ps
delete mode 100644 src/alien/oxygen/src/Makefile.in
delete mode 100644 src/clew/Makefile.in
delete mode 100644 src/gryphon/Makefile.in
delete mode 100644 src/impala/Makefile.in
delete mode 100644 src/mcl/Makefile.in
delete mode 100644 src/shcl/Makefile.in
delete mode 100644 src/shmcl/Makefile.in
delete mode 100644 src/shmcx/Makefile.in
delete mode 100644 src/shmcxquery/Makefile.in
delete mode 100644 src/shmx/Makefile.in
delete mode 100644 testing/Makefile.in
delete mode 100644 testing/blast/Makefile.in
delete mode 100644 testing/setops/Makefile.in
delete mode 100644 testing/stream/Makefile.in
delete mode 100644 util/Makefile.in
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