[med-svn] [bowtie] 01/02: Update d/tests/run-unit-test, export BOWTIE_INDEXES, enable test for example9

[Alex Mestiashvili]

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malex-guest pushed a commit to branch master
in repository bowtie.

commit 66ce3599f22a5e4cb27337c3f73c9dc449ad8dc5
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Wed Jan 31 12:20:40 2018 +0100

    Update d/tests/run-unit-test, export BOWTIE_INDEXES, enable test for example9
---
 debian/tests/run-unit-test | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test
index 2b3222b..235300c 100644
--- a/debian/tests/run-unit-test
+++ b/debian/tests/run-unit-test
@@ -1,4 +1,5 @@
 #!/bin/sh -e
+export BOWTIE_INDEXES='indexes'
 
 if [ "$1" = "test_at_build_time" ] ; then
     export PATH=.:$PATH
@@ -51,5 +52,5 @@ bowtie -a -m 5 -v 2 e_coli --suppress 1,5,6,7 -c ATGCATCATGCGCCAT			> example8.o
 check_result example8
 # Disabling test as the output of this version of bowtie differs from the older versions and
 # causes check_result to fail
-#bowtie -a -m 3 --best --strata -v 2 e_coli --suppress 1,5,6,7 -c ATGCATCATGCGCCAT	> example9.out
+bowtie -a -m 3 --best --strata -v 2 e_coli --suppress 1,5,6,7 -c ATGCATCATGCGCCAT	> example9.out
 #check_result example9

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