[med-svn] [Git][med-team/alter-sequence-alignment][master] 6 commits: Imported Upstream version 1.3.3+dfsg

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / alter-sequence-alignment


Commits:
4bc3cd0c by Andreas Tille at 2015-09-05T18:41:29+02:00
Imported Upstream version 1.3.3+dfsg
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ff5202b1 by Andreas Tille at 2018-07-04T09:10:31+02:00
Source moved to Github

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26303d18 by Andreas Tille at 2018-07-04T09:13:19+02:00
Nothing to exclude from upstream source any more

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c533e17e by Andreas Tille at 2018-07-04T09:16:13+02:00
New upstream version 1.3.4
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e518a339 by Andreas Tille at 2018-07-04T09:16:16+02:00
Update upstream source from tag 'upstream/1.3.4'

Update to upstream version '1.3.4'
with Debian dir 15ff2db117a82188bce96de9fa2dbe13003befe3
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4a5b42fc by Andreas Tille at 2018-07-04T13:11:22+02:00
New maven based build system

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30 changed files:

- + .gitignore
- + README.md
- + alter-lib/COPYING.LESSER
- − alter-lib/MANIFEST.MF
- − alter-lib/alter.sh
- − alter-lib/build.xml
- + alter-lib/pom.xml
- − alter-lib/src/alter.sh
- − alter-lib/src/cmdLine/package.html
- − alter-lib/src/converter/package.html
- − alter-lib/src/gui/ConvertPanel.form
- − alter-lib/src/gui/HelpPanel.form
- − alter-lib/src/gui/HelpPanel.java
- − alter-lib/src/gui/MainFrame.form
- − alter-lib/src/gui/package.html
- alter-lib/src/cmdLine/CmdLineLogHandler.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/cmdLine/CmdLineLogHandler.java
- alter-lib/src/cmdLine/CmdLineOptions.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/cmdLine/CmdLineOptions.java
- alter-lib/src/cmdLine/Convert.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/cmdLine/Convert.java
- + alter-lib/src/main/java/es/uvigo/ei/sing/alter/cmdLine/package-info.java
- alter-lib/src/converter/Converter.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/converter/Converter.java
- alter-lib/src/converter/DefaultConverter.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/converter/DefaultConverter.java
- alter-lib/src/converter/DefaultFactory.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/converter/DefaultFactory.java
- alter-lib/src/converter/Factory.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/converter/Factory.java
- alter-lib/src/converter/ProgramOptions.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/converter/ProgramOptions.java
- + alter-lib/src/main/java/es/uvigo/ei/sing/alter/converter/package-info.java
- alter-lib/src/gui/ConvertPanel.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/gui/ConvertPanel.java
- alter-lib/src/gui/GUILogHandler.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/gui/GUILogHandler.java
- + alter-lib/src/main/java/es/uvigo/ei/sing/alter/gui/HelpPanel.java
- alter-lib/src/gui/MainFrame.java → alter-lib/src/main/java/es/uvigo/ei/sing/alter/gui/MainFrame.java
- + alter-lib/src/main/java/es/uvigo/ei/sing/alter/gui/package-info.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/alter-sequence-alignment/compare/b5363f520386272941d97232882ab4dc6aba3d6c...4a5b42fcaec90493bed28d631b0e670d001c9c8e

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View it on GitLab: https://salsa.debian.org/med-team/alter-sequence-alignment/compare/b5363f520386272941d97232882ab4dc6aba3d6c...4a5b42fcaec90493bed28d631b0e670d001c9c8e
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