[med-svn] [Git][med-team/consensuscore][master] 10 commits: debhelper 11
Andreas Tille
gitlab at salsa.debian.org
Sat Jul 14 16:47:52 BST 2018
Andreas Tille pushed to branch master at Debian Med / consensuscore
Commits:
57121fce by Andreas Tille at 2018-07-14T17:07:42+02:00
debhelper 11
- - - - -
8ff08e3d by Andreas Tille at 2018-07-14T17:07:57+02:00
Point Vcs fields to salsa.debian.org
- - - - -
55ade84f by Andreas Tille at 2018-07-14T17:07:57+02:00
Standards-Version: 4.1.5
- - - - -
841b55c2 by Andreas Tille at 2018-07-14T17:07:57+02:00
Testsuite: autopkgtest-pkg-python
- - - - -
23f555c8 by Andreas Tille at 2018-07-14T17:18:22+02:00
Upload to unstable
- - - - -
05cd4282 by Andreas Tille at 2018-07-14T17:22:59+02:00
hardening=+all
- - - - -
28c286df by Andreas Tille at 2018-07-14T17:24:09+02:00
Drop mistakenly auto-injected Testsuite: autopkgtest-pkg-python instances
- - - - -
54d29a22 by Andreas Tille at 2018-07-14T17:25:40+02:00
respect DEB_BUILD_OPTIONS in override_dh_auto_test
- - - - -
1f571e04 by Andreas Tille at 2018-07-14T17:37:24+02:00
Upload to unstable
- - - - -
fb72933e by Andreas Tille at 2018-07-14T17:47:11+02:00
Merge commit '1f571e04657da63b6a4c70e2dfe0bc4d10040e62'
- - - - -
4 changed files:
- debian/changelog
- debian/compat
- debian/control
- debian/rules
Changes:
=====================================
debian/changelog
=====================================
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,16 @@
+consensuscore (1.0.2-3) unstable; urgency=medium
+
+ * Team upload.
+ * debhelper 11
+ * Point Vcs fields to salsa.debian.org
+ * Standards-Version: 4.1.5
+ * Testsuite: autopkgtest-pkg-python
+ * d/rules:
+ - hardening=+all
+ - respect DEB_BUILD_OPTIONS in override_dh_auto_test
+
+ -- Andreas Tille <tille at debian.org> Sat, 14 Jul 2018 17:26:27 +0200
+
consensuscore (1.0.2-2) unstable; urgency=low
* Fix build with GCC-6 (Closes: #831172)
=====================================
debian/compat
=====================================
--- a/debian/compat
+++ b/debian/compat
@@ -1 +1 @@
-9
+11
=====================================
debian/control
=====================================
--- a/debian/control
+++ b/debian/control
@@ -1,33 +1,32 @@
Source: consensuscore
-Section: science
-Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Afif Elghraoui <afif at debian.org>
-Build-Depends:
- debhelper (>= 9),
- dh-python,
- dh-exec,
- libboost-dev,
- swig,
+Section: science
+Testsuite: autopkgtest-pkg-python
+Priority: optional
+Build-Depends: debhelper (>= 11~),
+ dh-python,
+ dh-exec,
+ libboost-dev,
+ swig,
# Python2
- python-setuptools,
- python-all-dev,
- python-numpy,
+ python-setuptools,
+ python-all-dev,
+ python-numpy,
# Python3
- python3-setuptools,
- python3-all-dev,
- python3-numpy,
-Standards-Version: 3.9.8
+ python3-setuptools,
+ python3-all-dev,
+ python3-numpy
+Standards-Version: 4.1.5
+Vcs-Browser: https://salsa.debian.org/med-team/consensuscore
+Vcs-Git: https://salsa.debian.org/med-team/consensuscore.git
Homepage: https://github.com/PacificBiosciences/ConsensusCore
-Vcs-Git: https://anonscm.debian.org/git/debian-med/consensuscore.git
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/consensuscore.git
Package: libconsensuscore-dev
-Section: libdevel
Architecture: any-amd64 any-i386
-Depends:
- ${shlibs:Depends},
- ${misc:Depends},
+Section: libdevel
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
Description: algorithms for PacBio multiple sequence consensus -- development files
ConsensusCore is a library of C++ algorithms for Pacific Biosciences
multiple sequence consensus that powers Quiver (Python) and ConsensusTools
@@ -38,12 +37,11 @@ Description: algorithms for PacBio multiple sequence consensus -- development fi
It provides the header files and static library.
Package: python-pbconsensuscore
-Section: python
Architecture: any-amd64 any-i386
-Depends:
- ${shlibs:Depends},
- ${misc:Depends},
- ${python:Depends},
+Section: python
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ ${python:Depends}
Description: algorithms for PacBio multiple sequence consensus -- Python 2
ConsensusCore is a library of C++ algorithms for Pacific Biosciences
multiple sequence consensus that powers Quiver (Python) and ConsensusTools
@@ -54,12 +52,11 @@ Description: algorithms for PacBio multiple sequence consensus -- Python 2
It provides the Python2 bindings.
Package: python3-pbconsensuscore
-Section: python
Architecture: any-amd64 any-i386
-Depends:
- ${shlibs:Depends},
- ${misc:Depends},
- ${python3:Depends},
+Section: python
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ ${python3:Depends}
Description: algorithms for PacBio multiple sequence consensus -- Python 3
ConsensusCore is a library of C++ algorithms for Pacific Biosciences
multiple sequence consensus that powers Quiver (Python) and ConsensusTools
=====================================
debian/rules
=====================================
--- a/debian/rules
+++ b/debian/rules
@@ -6,15 +6,19 @@
export LC_ALL=C.UTF-8
export PYBUILD_NAME=pbconsensuscore
+export DEB_BUILD_MAINT_OPTIONS=hardening=+all
+
%:
dh $@ --with python2,python3 --buildsystem=pybuild
override_dh_auto_test:
+ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
$(MAKE) test
# We can't run these additional tests because they only pass
# with the python2 version of the package; by this point
# the python3 version has taken over.
# $(MAKE) test-python
+endif
override_dh_python2:
dh_python2
View it on GitLab: https://salsa.debian.org/med-team/consensuscore/compare/5c0006be452f5dbc489cfa00ed72f1f19eadc5f0...fb72933e307998d29d694fd88f06b39de59b9610
--
View it on GitLab: https://salsa.debian.org/med-team/consensuscore/compare/5c0006be452f5dbc489cfa00ed72f1f19eadc5f0...fb72933e307998d29d694fd88f06b39de59b9610
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