[med-svn] [Git][med-team/libgenome][master] 7 commits: Patches to drop version number
Andreas Tille
gitlab at salsa.debian.org
Wed Jul 18 12:09:21 BST 2018
Andreas Tille pushed to branch master at Debian Med / libgenome
Commits:
d7f513d6 by Andreas Tille at 2018-07-18T12:07:26+02:00
Patches to drop version number
- - - - -
ef10129e by Andreas Tille at 2018-07-18T12:54:26+02:00
Fix library name, add conflicts with old library
- - - - -
136a9f78 by Andreas Tille at 2018-07-18T13:05:23+02:00
Add symbols file
- - - - -
8987d3d3 by Andreas Tille at 2018-07-18T13:06:24+02:00
debhelper 11
- - - - -
4ea32d5a by Andreas Tille at 2018-07-18T13:06:48+02:00
Point Vcs fields to salsa.debian.org
- - - - -
cc723519 by Andreas Tille at 2018-07-18T13:06:48+02:00
Standards-Version: 4.1.5
- - - - -
3e2212f5 by Andreas Tille at 2018-07-18T13:08:01+02:00
Upload to unstable
- - - - -
7 changed files:
- debian/changelog
- debian/compat
- debian/control
- + debian/libgenome0.symbols
- debian/patches/drop-version-number.patch
- debian/patches/series
- debian/rules
Changes:
=====================================
debian/changelog
=====================================
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,10 +1,14 @@
-libgenome (1.3.11+svn20110227.4616-1) UNRELEASED; urgency=medium
+libgenome (1.3.11+svn20110227.4616-1) unstable; urgency=medium
* New upstream SVN checkout
* Rewrote get-orig-source to fetch source tarball from SVN
* Drop version number from package name
+ * Add symbols file
+ * debhelper 11
+ * Point Vcs fields to salsa.debian.org
+ * Standards-Version: 4.1.5
- -- Andreas Tille <tille at debian.org> Wed, 11 Jul 2018 15:35:15 +0200
+ -- Andreas Tille <tille at debian.org> Wed, 18 Jul 2018 13:06:48 +0200
libgenome (1.3.1-10) unstable; urgency=medium
=====================================
debian/compat
=====================================
--- a/debian/compat
+++ b/debian/compat
@@ -1 +1 @@
-10
+11
=====================================
debian/control
=====================================
--- a/debian/control
+++ b/debian/control
@@ -3,17 +3,17 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
Uploaders: Andreas Tille <tille at debian.org>
Section: science
Priority: optional
-Build-Depends: debhelper (>= 10),
+Build-Depends: debhelper (>= 11~),
d-shlibs (>= 0.61)
-Standards-Version: 4.1.1
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/libgenome.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/libgenome.git
+Standards-Version: 4.1.5
+Vcs-Browser: https://salsa.debian.org/med-team/libgenome
+Vcs-Git: https://salsa.debian.org/med-team/libgenome.git
Homepage: https://sourceforge.net/projects/libgenome/
Package: libgenome-dev
Architecture: any
Section: libdevel
-Depends: libgenome1 (= ${binary:Version}),
+Depends: libgenome0 (= ${binary:Version}),
${misc:Depends},
${devlibs:Depends}
Conflicts: libgenome-1.3-dev
@@ -34,13 +34,16 @@ Description: toolkit for developing bioinformatic related software (devel)
This is the development package containing the statically linked
library and the header files.
-Package: libgenome1
+Package: libgenome0
Architecture: any
Multi-Arch: same
Section: libs
Depends: ${shlibs:Depends},
${misc:Depends}
Pre-Depends: ${misc:Pre-Depends}
+Conflicts: libgenome-1.3-0v5
+Provides: libgenome-1.3-0v5
+Replaces: libgenome-1.3-0v5
Description: toolkit for developing bioinformatic related software
libGenome is a freely available toolkit for developing bioinformatic related
software in C++. It is intended to take the hassle out of performing common
=====================================
debian/libgenome0.symbols
=====================================
--- /dev/null
+++ b/debian/libgenome0.symbols
@@ -0,0 +1,759 @@
+libGenome.so.0 libgenome0 #MINVER#
+ _ZN6genome10gnBaseSpec11SetCircularEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnBaseSpec5ClearEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnBaseSpec7SetNameERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnBaseSpecD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnBaseSpecD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnBaseSpecD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation12MoveNegativeEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation12MovePositiveEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation5ClearEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation6CropToERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation6MoveToEiy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation7CropEndEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation9CropStartEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation9SetBoundsEyy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocation9SetBoundsEyyyy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationC1EyyNS0_14gnLocationTypeENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationC1EyyyyNS0_14gnLocationTypeENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationC2EyyNS0_14gnLocationTypeENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationC2EyyyyNS0_14gnLocationTypeENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnLocationD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence10LoadSourceENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence10addFeatureEPNS_13gnBaseFeatureE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence11setCircularEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence11splitContigEyj at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence12mergeContigsEjj at Base 1.3.11+svn20110227.4616
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+ _ZN6genome10gnSequence13removeFeatureEj at Base 1.3.11+svn20110227.4616
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+ _ZN6genome10gnSequence13setFilterListERNSt7__cxx114listIPKNS_12gnBaseFilterESaIS5_EEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence19isReverseComplementEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence20setReverseComplementEhj at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence5eraseEyy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence5mergeEyy at Base 1.3.11+svn20110227.4616
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+ _ZN6genome10gnSequence6assignERS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence6insertEyPKcy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence6insertEyRKNS_12gnGenomeSpecE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence6insertEyRKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence7SetSpecEPNS_12gnGenomeSpecE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence9addHeaderEjPNS_12gnBaseHeaderEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequence9setFilterEPKNS_12gnBaseFilterE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC1EPKc at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC1EPcy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC1ERKNS_12gnContigSpecE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC1ERKNS_12gnGenomeSpecE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC1ERKNS_14gnFragmentSpecE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC2EPKc at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC2EPcy at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC2ERKNS_12gnContigSpecE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC2ERKNS_12gnGenomeSpecE at Base 1.3.11+svn20110227.4616
+ _ZN6genome10gnSequenceC2ERKNS_14gnFragmentSpecE at Base 1.3.11+svn20110227.4616
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+ _ZN6genome11WriteHeaderINS_12gnContigSpecEEEvPNS_11gnMultiSpecIT_EERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERSt14basic_ofstreamIcS9_E at Base 1.3.11+svn20110227.4616
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+ _ZN6genome11gnExceptionD1Ev at Base 1.3.11+svn20110227.4616
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+ _ZN6genome11gnFASSource11ParseStreamERSi at Base 1.3.11+svn20110227.4616
+ _ZN6genome11gnFASSource11SeqReadImplEyPcRyj at Base 1.3.11+svn20110227.4616
+ _ZN6genome11gnFASSource11SeqStartPosEyRNS_12gnFileContigERyS3_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome11gnFASSource5WriteEPNS_12gnBaseSourceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome11gnFASSource5WriteERNS_10gnSequenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEhh at Base 1.3.11+svn20110227.4616
+ _ZN6genome11gnFASSource5WriteERNS_10gnSequenceERSohh at Base 1.3.11+svn20110227.4616
+ _ZN6genome11gnFASSource7SeqReadEyPcRyj at Base 1.3.11+svn20110227.4616
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+ _ZN6genome11gnMultiSpecINS_14gnFragmentSpecEE12RemoveHeaderEj at Base 1.3.11+svn20110227.4616
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+ _ZN6genome12gnContigSpec20SetSourceContigIndexEj at Base 1.3.11+svn20110227.4616
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+ _ZN6genome12gnContigSpec8SetStartEy at Base 1.3.11+svn20110227.4616
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+ _ZN6genome12gnFileContig16SetRepeatSeqSizeEy at Base 1.3.11+svn20110227.4616
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+ _ZN6genome12gnFileContigD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileContigD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSource20DetermineNewlineTypeEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSource4OpenENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSource4OpenEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSource4ReadEyPcRy at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSource5CloseEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSource9SetFilterEPNS_8gnFilterE at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSourceC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSourceC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSourceC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSourceC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSourceD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSourceD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnFileSourceD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpec10AddFeatureEPNS_13gnBaseFeatureE at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpec13RemoveFeatureEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpec14MergeFragmentsEjj at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpec20SetReverseComplementEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpec5ClearEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpecC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpecC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpecC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpecC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpecD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpecD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnGenomeSpecD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpec5ClearEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecC1EPNS_12gnBaseSourceEjyyh at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecC2EPNS_12gnBaseSourceEjyyh at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnSourceSpecD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpec5ClearEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEyyh at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecC2ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEyyh at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnStringSpecD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator10RemovePairERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator20DNAProteinTranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator20ProteinDNATranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator20ProteinRNATranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator20RNAProteinTranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator26CreateDNAProteinTranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator26CreateProteinDNATranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator26CreateProteinRNATranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator26CreateRNAProteinTranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslator7SetPairERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorC1ENS0_16gnTranslatorTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorC2ENS0_16gnTranslatorTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12gnTranslatorD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome12isWhiteSpaceEc at Base 1.3.11+svn20110227.4616
+ _ZN6genome12uintToStringB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZN6genome13getFileStringENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome13getPathStringENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature11AddLocationERKNS_10gnLocationEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature11SetLocationERKNS_10gnLocationEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature12AddQualifierEPNS_15gnBaseQualifierE at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature12GetQualifierEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature12MoveNegativeEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature12MovePositiveEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature12SetQualifierERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES7_j at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature14RemoveLocationEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature15RemoveQualifierEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature15SetLocationTypeENS_10gnLocation14gnLocationTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature16SetQualifierNameERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature17SetQualifierValueERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature4CropERKNS_10gnLocationE at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature5SetIDEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature7CropEndEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature7SetNameERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature7SetSpecEPNS_14gnFragmentSpecE at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature9CropStartEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeature9SetBrokenEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeatureC1ERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEjPNS_14gnFragmentSpecENS_10gnLocation14gnLocationTypeEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeatureC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeatureC2ERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEjPNS_14gnFragmentSpecENS_10gnLocation14gnLocationTypeEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeatureC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeatureD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeatureD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome13gnBaseFeatureD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome13parseIntValueERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome13ulongToStringB5cxx11Em at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpec10AddFeatureEPNS_13gnBaseFeatureE at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpec13RemoveFeatureEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpec20SetReverseComplementEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpec5ClearEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpec7CropEndEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpec9CropStartEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpecC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpecC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpecC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpecC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpecD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpecD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnFragmentSpecD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderC1EPNS_12gnBaseSourceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEjj at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderC2EPNS_12gnBaseSourceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEjj at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnSourceHeaderD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnStringHeaderD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnStringHeaderD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14gnStringHeaderD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome14parseUintValueERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome14removeEndSpaceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome14tokenizeStringB5cxx11EPKcjc at Base 1.3.11+svn20110227.4616
+ _ZN6genome14tokenizeStringERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEc at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory14DelSourceClassERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory14SetSourceClassERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKNS_12gnBaseSourceE at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory16GetSourceFactoryEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory6GetURLERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory7AddPathERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory7DelPathEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory7InsPathERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory9AddSourceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory9DelSourceEPKNS_12gnBaseSourceE at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactory9DelSourceEj at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactoryC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactoryC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactoryD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome15gnSourceFactoryD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslator15CacheTranslatorEPKNS_12gnTranslatorENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEy at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslator20DNAProteinTranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslator20ProteinDNATranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorC1ENS0_16gnTranslatorTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorC2ENS0_16gnTranslatorTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome16gnFastTranslatorD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierC1EPNS_12gnBaseSourceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEjj at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierC2EPNS_12gnBaseSourceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEjj at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnSourceQualifierD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnStringQualifierD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnStringQualifierD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome17gnStringQualifierD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome18getFileNoExtStringENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome21standardizePathStringERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslator20DNAProteinTranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslator20ProteinDNATranslatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorC1ENS0_16gnTranslatorTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorC2ENS0_16gnTranslatorTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome23gnPosSpecificTranslatorD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome7isSpaceEc at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter14DNAtoRNAFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter14RNAtoDNAFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter16fullDNASeqFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter16fullRNASeqFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter16proteinSeqFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter17basicDNASeqFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter17basicRNASeqFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter19CreateFullDNAFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter19CreateFullRNAFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter19CreateProteinFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter19DNAComplementFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter19RNAComplementFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter20CreateBasicDNAFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter20CreateBasicRNAFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter20CreateDNAtoRNAFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter20CreateRNAtoDNAFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter21numberCharacterFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter23alphabetCharacterFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter25CreateDNAComplementFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter25CreateRNAComplementFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter27CreateNumberCharacterFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilter29CreateAlphabetCharacterFilterEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterC1ENS0_12gnFilterTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterC1Ecc at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterC2ENS0_12gnFilterTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterC2Ecc at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome8gnFilterD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9BaseCountERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERyS8_S8_S8_S8_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompare13AddArrayEntryEPPccc at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompare13DNASeqCompareEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompare13DelArrayEntryEPPccc at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompare13RNASeqCompareEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompare17ProteinSeqCompareEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompare19CreateDNAComparatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompare19CreateRNAComparatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompare23CreateProteinComparatorEv at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompareC1ENS0_13gnCompareTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompareC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompareC2ENS0_13gnCompareTypeE at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompareC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompareD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompareD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnCompareD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureC1ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureC1ERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEjNS_10gnLocation14gnLocationTypeEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureC1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureC2ERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureC2ERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEjNS_10gnLocation14gnLocationTypeEh at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureC2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureD0Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureD1Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9gnFeatureD2Ev at Base 1.3.11+svn20110227.4616
+ _ZN6genome9isNewLineEc at Base 1.3.11+svn20110227.4616
+ _ZN6genomelsERSoRKNS_10gnSequenceE at Base 1.3.11+svn20110227.4616
+ _ZN6genomelsERSoRKNS_11gnExceptionE at Base 1.3.11+svn20110227.4616
+ _ZN6genomersERSiRNS_10gnSequenceE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnBaseSpec10IsCircularEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnBaseSpec19IsReverseComplementEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnBaseSpec7GetNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnLocation10IntersectsERKS0_NS0_20intersectRestrictionE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnLocation15GetIntersectionERKS0_NS0_20intersectRestrictionE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnLocation5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnLocation8ContainsERKS0_NS0_20intersectRestrictionE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnLocation8GetUnionERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnLocation9GetBoundsERyS1_S1_S1_ at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence10contigNameB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence10getFeatureEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence10isCircularEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence11contigStartEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence12contigByBaseEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence12contigByNameERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence12contigLengthEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence13getFilterListB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence13globalToLocalERjRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence13localToGlobalEjRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence13localToSourceERjRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence14contigListSizeEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence14globalToSourceERjRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence16contigListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence17contigIndexByBaseEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence17contigIndexByNameERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence17getBrokenFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence19getHeaderListLengthEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence20getContainedFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EERS4_IjSaIjEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence20getFeatureListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence23getIntersectingFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EERS4_IjSaIjEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence4findERKS0_y at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence4sizeEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence6contigEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence6lengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence6subseqEyy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence7GetSeqCEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence7GetSpecEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence7ToArrayEPcyy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence7compareERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence7compareERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence8ToStringB5cxx11Eyy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence8ToStringERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEyy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequence9getHeaderEjj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequenceixEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome10gnSequenceplERKS0_ at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource11GetContigIDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource13GetContigNameB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource13GetFileContigEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource18GetContigSeqLengthEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource19GetContigListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource7GetSpecEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource9GetContigEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnFASSource9HasContigERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnGBKSource11GetContigIDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnGBKSource13GetContigNameB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnGBKSource13GetFileContigEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnGBKSource18GetContigSeqLengthEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnGBKSource19GetContigListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnGBKSource5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnGBKSource7GetSpecEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnGBKSource9HasContigERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE13GetSourceNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE13GetSpecByBaseEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE14GetSpecEndBaseEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE16GetSpecStartBaseEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE17GetSpecListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE18GetSpecIndexByBaseEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE18GetSpecIndexByNameERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE19GetHeaderListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE7GetSpecEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE7SeqReadEyPcRyj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE9GetHeaderERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE9GetHeaderEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_12gnContigSpecEE9GetLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE13GetSourceNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE13GetSpecByBaseEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE14GetSpecEndBaseEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE16GetSpecStartBaseEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE17GetSpecListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE18GetSpecIndexByBaseEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE18GetSpecIndexByNameERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE19GetHeaderListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE7GetSpecEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE7SeqReadEyPcRyj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE9GetHeaderERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE9GetHeaderEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnMultiSpecINS_14gnFragmentSpecEE9GetLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnRAWSource11GetContigIDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnRAWSource13GetContigNameB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnRAWSource13GetFileContigEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnRAWSource18GetContigSeqLengthEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnRAWSource19GetContigListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnRAWSource5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnRAWSource7GetSpecEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnRAWSource9HasContigERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnSEQSource11GetContigIDERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnSEQSource13GetContigNameB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnSEQSource13GetFileContigEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnSEQSource18GetContigSeqLengthEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnSEQSource19GetContigListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnSEQSource5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnSEQSource7GetSpecEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome11gnSEQSource9HasContigERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnBaseFilter7GetNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnContigSpec13GetSourceNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnContigSpec20GetSourceContigIndexEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnContigSpec7SeqReadEyPcRyj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnContigSpec8GetStartEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnContigSpec9GetLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnFileContig5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnFileSource13GetOpenStringB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnFileSource9GetFilterEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnGenomeSpec10CloneRangeEyy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnGenomeSpec10GetFeatureEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnGenomeSpec17GetBrokenFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnGenomeSpec20GetContainedFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EERS4_IjSaIjEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnGenomeSpec20GetFeatureListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnGenomeSpec23GetIntersectingFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EERS4_IjSaIjEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnGenomeSpec5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnSourceSpec10CloneRangeEyy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnSourceSpec15GetSourceLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnSourceSpec4ReadEyPcRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnSourceSpec5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnSourceSpec9GetSourceEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnStringSpec10CloneRangeEyy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnStringSpec15GetSourceLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnStringSpec4ReadEyPcRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnStringSpec5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnStringSpec9GetSourceEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnTranslator5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnTranslator6FilterEPPcRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnTranslator6FilterERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome12gnTranslator6FilterEc at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature10IntersectsEPS0_ at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature10IntersectsERKNS_10gnLocationE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature11GetLocationEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature12HasQualifierERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature13IsContainedByERKNS_10gnLocationE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature15GetLocationTypeEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature16GetQualifierNameB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature17GetQualifierValueB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature20LastIndexOfQualifierERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature21FirstIndexOfQualifierERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature21GetLocationListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature22GetQualifierListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature5GetIDEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature7GetNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature7GetSpecEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature8ContainsEPS0_ at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature8ContainsERKNS_10gnLocationE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature8ContainsEy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome13gnBaseFeature8IsBrokenEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnFragmentSpec10CloneRangeEyy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnFragmentSpec10GetFeatureEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnFragmentSpec17GetBrokenFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnFragmentSpec20GetContainedFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EERS4_IjSaIjEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnFragmentSpec20GetFeatureListLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnFragmentSpec23GetIntersectingFeaturesERKNS_10gnLocationERSt6vectorIPNS_13gnBaseFeatureESaIS6_EERS4_IjSaIjEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnFragmentSpec5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnSourceHeader13GetHeaderNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnSourceHeader5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnSourceHeader9GetHeaderB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnSourceHeader9GetLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnStringHeader13GetHeaderNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnStringHeader5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnStringHeader9GetHeaderB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome14gnStringHeader9GetLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome15gnSourceFactory10PathExistsENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome15gnSourceFactory14GetSourceClassERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome15gnSourceFactory14HasSourceClassERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome15gnSourceFactory16MatchSourceClassERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome15gnSourceFactory7GetPathB5cxx11Ej at Base 1.3.11+svn20110227.4616
+ _ZNK6genome15gnSourceFactory7HasPathENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome15gnSourceFactory9GetSourceEj at Base 1.3.11+svn20110227.4616
+ _ZNK6genome15gnSourceFactory9HasSourceENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEh at Base 1.3.11+svn20110227.4616
+ _ZNK6genome16gnFastTranslator5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome16gnFastTranslator6FilterEPPcRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome16gnFastTranslator6FilterERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome16gnFastTranslator6FilterEc at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnSourceQualifier13GetNameLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnSourceQualifier14GetValueLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnSourceQualifier5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnSourceQualifier7GetNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnSourceQualifier8GetValueB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnStringQualifier13GetNameLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnStringQualifier14GetValueLengthEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnStringQualifier5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnStringQualifier7GetNameB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome17gnStringQualifier8GetValueB5cxx11Ev at Base 1.3.11+svn20110227.4616
+ _ZNK6genome23gnPosSpecificTranslator5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome23gnPosSpecificTranslator6FilterEPPcRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome23gnPosSpecificTranslator6FilterERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome23gnPosSpecificTranslator6FilterEc at Base 1.3.11+svn20110227.4616
+ _ZNK6genome8gnFilter13ReverseFilterEPPcRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome8gnFilter13ReverseFilterERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome8gnFilter5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome8gnFilter6FilterEPPcRy at Base 1.3.11+svn20110227.4616
+ _ZNK6genome8gnFilter6FilterERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.3.11+svn20110227.4616
+ _ZNK6genome8gnFilter6FilterEc at Base 1.3.11+svn20110227.4616
+ _ZNK6genome9gnCompare5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNK6genome9gnCompare8ContainsEPKcS2_jh at Base 1.3.11+svn20110227.4616
+ _ZNK6genome9gnCompare8ContainsERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_h at Base 1.3.11+svn20110227.4616
+ _ZNK6genome9gnCompare8ContainsEcch at Base 1.3.11+svn20110227.4616
+ _ZNK6genome9gnFeature5CloneEv at Base 1.3.11+svn20110227.4616
+ _ZNKSt5ctypeIcE8do_widenEc at Base 1.3.11+svn20110227.4616
+ _ZNKSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN6genome12gnBaseSourceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE4findERS7_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIN6genome10gnLocationESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIN6genome10gnLocationESaIS1_EED1Ev at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIN6genome10gnLocationESaIS1_EED2Ev at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE12emplace_backIJS5_EEEvDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE6insertEN9__gnu_cxx17__normal_iteratorIPKS5_S7_EERSA_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPS5_S7_EE at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEaSERKS7_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome12gnBaseHeaderESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome12gnBaseSourceESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome12gnBaseSourceESaIS2_EE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPS2_S4_EE at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome12gnContigSpecESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome12gnContigSpecESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome12gnContigSpecESaIS2_EEaSERKS4_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome12gnFileContigESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome13gnBaseFeatureESaIS2_EE12emplace_backIJS2_EEEvDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome13gnBaseFeatureESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome13gnBaseFeatureESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome14gnFragmentSpecESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome14gnFragmentSpecESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome14gnFragmentSpecESaIS2_EE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPS2_S4_EE at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome14gnFragmentSpecESaIS2_EEaSERKS4_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome15gnBaseQualifierESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIPN6genome15gnBaseQualifierESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt6vectorIySaIyEE17_M_realloc_insertIJyEEEvN9__gnu_cxx17__normal_iteratorIPyS1_EEDpOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt7__cxx1110_List_baseINS_12basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE8_M_clearEv at Base 1.3.11+svn20110227.4616
+ _ZNSt7__cxx114listIPKN6genome12gnBaseFilterESaIS4_EE18_M_assign_dispatchISt20_List_const_iteratorIS4_EEEvT_SA_St12__false_type at Base 1.3.11+svn20110227.4616
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN6genome12gnBaseSourceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE16_M_insert_uniqueISB_EES6_ISt17_Rb_tree_iteratorISB_EbEOT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN6genome12gnBaseSourceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE4findERS7_ at Base 1.3.11+svn20110227.4616
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_PN6genome12gnBaseSourceEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE8_M_eraseEPSt13_Rb_tree_nodeISB_E at Base 1.3.11+svn20110227.4616
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_ at Base 1.3.11+svn20110227.4616
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_ at Base 1.3.11+svn20110227.4616
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE7_M_copyINSE_20_Reuse_or_alloc_nodeEEEPSt13_Rb_tree_nodeIS8_EPKSI_PSt18_Rb_tree_node_baseRT_ at Base 1.3.11+svn20110227.4616
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE8_M_eraseEPSt13_Rb_tree_nodeIS8_E at Base 1.3.11+svn20110227.4616
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EEaSERKSE_ at Base 1.3.11+svn20110227.4616
+ _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EERKS8_SA_ at Base 1.3.11+svn20110227.4616
+ _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EES5_RKS8_ at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome10gnBaseSpecE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome10gnLocationE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome10gnSequenceE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome11gnExceptionE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome11gnFASSourceE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome11gnGBKSourceE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome11gnMultiSpecINS_12gnContigSpecEEE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome11gnMultiSpecINS_14gnFragmentSpecEEE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome11gnRAWSourceE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome11gnSEQSourceE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnBaseFilterE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnBaseHeaderE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnBaseSourceE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnContigSpecE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnFileContigE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnFileSourceE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnGenomeSpecE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnSourceSpecE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnStringSpecE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome12gnTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome13gnBaseFeatureE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome14gnFragmentSpecE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome14gnSourceHeaderE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome14gnStringHeaderE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome15gnBaseQualifierE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome16gnFastTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome17gnSourceQualifierE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome17gnStringQualifierE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome23gnPosSpecificTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome7gnCloneE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome8gnFilterE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome9gnCompareE at Base 1.3.11+svn20110227.4616
+ _ZTIN6genome9gnFeatureE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome10gnBaseSpecE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome10gnLocationE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome10gnSequenceE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome11gnExceptionE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome11gnFASSourceE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome11gnGBKSourceE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome11gnMultiSpecINS_12gnContigSpecEEE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome11gnMultiSpecINS_14gnFragmentSpecEEE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome11gnRAWSourceE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome11gnSEQSourceE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnBaseFilterE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnBaseHeaderE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnBaseSourceE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnContigSpecE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnFileContigE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnFileSourceE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnGenomeSpecE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnSourceSpecE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnStringSpecE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome12gnTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome13gnBaseFeatureE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome14gnFragmentSpecE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome14gnSourceHeaderE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome14gnStringHeaderE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome15gnBaseQualifierE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome16gnFastTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome17gnSourceQualifierE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome17gnStringQualifierE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome23gnPosSpecificTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome7gnCloneE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome8gnFilterE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome9gnCompareE at Base 1.3.11+svn20110227.4616
+ _ZTSN6genome9gnFeatureE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome10gnBaseSpecE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome10gnLocationE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome10gnSequenceE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome11gnFASSourceE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome11gnGBKSourceE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome11gnMultiSpecINS_12gnContigSpecEEE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome11gnMultiSpecINS_14gnFragmentSpecEEE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome11gnRAWSourceE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome11gnSEQSourceE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome12gnBaseFilterE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome12gnContigSpecE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome12gnFileContigE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome12gnFileSourceE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome12gnGenomeSpecE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome12gnSourceSpecE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome12gnStringSpecE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome12gnTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome13gnBaseFeatureE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome14gnFragmentSpecE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome14gnSourceHeaderE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome14gnStringHeaderE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome16gnFastTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome17gnSourceQualifierE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome17gnStringQualifierE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome23gnPosSpecificTranslatorE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome8gnFilterE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome9gnCompareE at Base 1.3.11+svn20110227.4616
+ _ZTVN6genome9gnFeatureE at Base 1.3.11+svn20110227.4616
+ _ZZN6genome11gnRAWSource12CheckRawDataEhhE14check_raw_data at Base 1.3.11+svn20110227.4616
+ _ZZN6genome19GetNewExceptionCodeEvE8new_code at Base 1.3.11+svn20110227.4616
=====================================
debian/patches/drop-version-number.patch
=====================================
--- a/debian/patches/drop-version-number.patch
+++ b/debian/patches/drop-version-number.patch
@@ -9,7 +9,12 @@ Description: Drop version number from library file name
--- a/libGenome/Makefile.am
+++ b/libGenome/Makefile.am
-@@ -35,9 +35,9 @@ library_includedir=$(includedir)/$(GENER
+@@ -31,13 +31,13 @@ gnRAWSource.cpp gnBaseFeature.cpp gnSEQS
+ gnContigSpec.cpp gnSourceHeader.cpp gnException.cpp \
+ gnFastTranslator.cpp gnPosSpecificTranslator.cpp gnDefs.cpp
+
+-library_includedir=$(includedir)/$(GENERIC_LIBRARY_NAME)-$(GENERIC_API_VERSION)/$(GENERIC_LIBRARY_NAME)
++library_includedir=$(includedir)/$(GENERIC_LIBRARY_NAME)
library_include_HEADERS = $(LIBGENOME_H)
@@ -22,3 +27,52 @@ Description: Drop version number from library file name
+--- /dev/null
++++ b/libGenome.pc.in
+@@ -0,0 +1,12 @@
++prefix=@prefix@
++exec_prefix=@exec_prefix@
++libdir=@libdir@
++includedir=@includedir@
++
++Name: libGenome
++Description: c++ library supporting sequence I/O and manipulation
++Version: @VERSION@
++Requires:
++Libs: @OPENMP_CXXFLAGS@ -L${libdir} -lGenome
++Cflags: @OPENMP_CXXFLAGS@ -I${includedir}/@GENERIC_LIBRARY_NAME@
++
+--- a/Makefile.am
++++ b/Makefile.am
+@@ -9,7 +9,7 @@ projects/libGenome.nsi \
+ projects/libGenome.doxygen
+
+ pkgconfigdir = $(libdir)/pkgconfig
+-pkgconfig_DATA = libGenome- at GENERIC_API_VERSION@.pc
++pkgconfig_DATA = libGenome.pc
+
+ SUBDIRS = libGenome
+
+--- a/libGenome-1.3.pc.in
++++ /dev/null
+@@ -1,12 +0,0 @@
+-prefix=@prefix@
+-exec_prefix=@exec_prefix@
+-libdir=@libdir@
+-includedir=@includedir@
+-
+-Name: libGenome
+-Description: c++ library supporting sequence I/O and manipulation
+-Version: @VERSION@
+-Requires:
+-Libs: @OPENMP_CXXFLAGS@ -L${libdir} -lGenome- at GENERIC_API_VERSION@
+-Cflags: @OPENMP_CXXFLAGS@ -I${includedir}/@GENERIC_LIBRARY_NAME at -@GENERIC_API_VERSION@
+-
+--- a/configure.ac
++++ b/configure.ac
+@@ -121,4 +121,4 @@ AC_PROG_GCC_TRADITIONAL
+ dnl SAVE_LIBRARY_VERSION
+ AC_SUBST(LIBTOOL_VERSION_INFO)
+
+-AC_OUTPUT(Makefile libGenome/Makefile libGenome-1.3.pc )
++AC_OUTPUT(Makefile libGenome/Makefile libGenome.pc )
=====================================
debian/patches/series
=====================================
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1 +1,2 @@
gcc-6.1.patch
+drop-version-number.patch
=====================================
debian/rules
=====================================
--- a/debian/rules
+++ b/debian/rules
@@ -10,7 +10,6 @@ override_dh_install:
# Call d-shlibmove to comply with library packaging guide
# mv debian/tmp/usr/include/*/* debian/tmp/usr/include/
d-shlibmove --commit \
- --v5 \
--multiarch \
--devunversioned \
--exclude-la \
View it on GitLab: https://salsa.debian.org/med-team/libgenome/compare/b798f2ab3bc3ef16568dc1b0ac2f32f175ad0680...3e2212f5b366ec4a752b51c7bc95f6ef2e8e0963
--
View it on GitLab: https://salsa.debian.org/med-team/libgenome/compare/b798f2ab3bc3ef16568dc1b0ac2f32f175ad0680...3e2212f5b366ec4a752b51c7bc95f6ef2e8e0963
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