[med-svn] [Git][med-team/python-biopython][master] 10 commits: New upstream version 1.72+dfsg

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / python-biopython


Commits:
b6788a47 by Andreas Tille at 2018-07-28T01:49:06Z
New upstream version 1.72+dfsg
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c38f7a2a by Andreas Tille at 2018-07-28T01:49:34Z
Update upstream source from tag 'upstream/1.72+dfsg'

Update to upstream version '1.72+dfsg'
with Debian dir 3deadeff0e407e01f901e8450d08ce4336afede8
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c0b9cbec by Andreas Tille at 2018-07-28T01:49:35Z
New upstream version

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b7eb641a by Andreas Tille at 2018-07-28T02:03:15Z
Standards-Version: 4.1.5

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b6ecf3b5 by Andreas Tille at 2018-07-28T02:10:31Z
Adapt patches to new upstream version

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5d955562 by Andreas Tille at 2018-07-28T02:13:48Z
New version closes bug

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3d620886 by Andreas Tille at 2018-07-28T02:42:25Z
debian/rules: Respect DEB_BUILD_OPTIONS in dh_auto_test

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f327ab9c by Andreas Tille at 2018-07-28T02:43:38Z
Drop ancient Python version fields

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0c1686ee by Andreas Tille at 2018-07-28T02:45:23Z
Deactivate exclusion of samtools_tool test and see if it works

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be0a7886 by Andreas Tille at 2018-07-28T03:00:57Z
Upload to unstable

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30 changed files:

- .github/PULL_REQUEST_TEMPLATE.md
- .travis-tox.ini
- .travis.yml
- Bio/Align/AlignInfo.py
- Bio/Align/Applications/_ClustalOmega.py
- Bio/Align/Applications/_Clustalw.py
- Bio/Align/Applications/_Dialign.py
- Bio/Align/Applications/_MSAProbs.py
- Bio/Align/Applications/_Mafft.py
- Bio/Align/Applications/_Muscle.py
- Bio/Align/Applications/_Prank.py
- Bio/Align/Applications/_Probcons.py
- Bio/Align/Applications/_TCoffee.py
- Bio/Align/Applications/__init__.py
- Bio/Align/__init__.py
- + Bio/Align/_aligners.c
- Bio/AlignIO/ClustalIO.py
- Bio/AlignIO/EmbossIO.py
- Bio/AlignIO/FastaIO.py
- Bio/AlignIO/Interfaces.py
- Bio/AlignIO/MafIO.py
- Bio/AlignIO/MauveIO.py
- Bio/AlignIO/StockholmIO.py
- Bio/AlignIO/__init__.py
- Bio/Alphabet/IUPAC.py
- Bio/Alphabet/Reduced.py
- Bio/Alphabet/__init__.py
- Bio/Application/__init__.py
- Bio/Blast/NCBIStandalone.py
- Bio/Blast/NCBIWWW.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-biopython/compare/ea6475be3429f1e6cdc888e7ea66ab0a8bfb95b7...be0a78869e9fbc9d3a16a2a0f4d9591341691952

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View it on GitLab: https://salsa.debian.org/med-team/python-biopython/compare/ea6475be3429f1e6cdc888e7ea66ab0a8bfb95b7...be0a78869e9fbc9d3a16a2a0f4d9591341691952
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