[med-svn] [Git][med-team/libsmithwaterman][master] 3 commits: Fix symbol that seems to be exported on all architectures

[Graham Inggs]

Graham Inggs pushed to branch master at Debian Med / libsmithwaterman


Commits:
dd3dfdc5 by Graham Inggs at 2018-06-12T21:31:44+02:00
Fix symbol that seems to be exported on all architectures

- - - - -
11d80b1c by Graham Inggs at 2018-06-12T21:52:30+02:00
Mark symbols that are optimized away when building with -O3

- - - - -
8cdb7d6f by Graham Inggs at 2018-06-12T21:53:39+02:00
Prepare for upload to unstable

- - - - -


2 changed files:

- debian/changelog
- debian/libsmithwaterman0.symbols


Changes:

=====================================
debian/changelog
=====================================
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,11 @@
+libsmithwaterman (0.0+git20160702.2610e25-4) unstable; urgency=medium
+
+  * Team upload
+  * Fix symbol that seems to be exported on all architectures
+  * Mark symbols that are optimized away when building with -O3
+
+ -- Graham Inggs <ginggs at debian.org>  Tue, 12 Jun 2018 19:52:49 +0000
+
 libsmithwaterman (0.0+git20160702.2610e25-3) unstable; urgency=medium
 
   * More specific symbols for mips and mipsel


=====================================
debian/libsmithwaterman0.symbols
=====================================
--- a/debian/libsmithwaterman0.symbols
+++ b/debian/libsmithwaterman0.symbols
@@ -48,13 +48,13 @@ libsmithwaterman.so.0 libsmithwaterman0 #MINVER#
  _ZN20CBandedSmithWatermanD1Ev at Base 0.0+git20160702.2610e25
  _ZN20CBandedSmithWatermanD2Ev at Base 0.0+git20160702.2610e25
  (arch=!mips !mipsel)_ZNKSt5ctypeIcE8do_widenEc at Base 0.0+git20160702.2610e25
- _ZNSt6vectorI11IndelAlleleSaIS0_EE12emplace_backIJS0_EEEvDpOT_ at Base 0.0+git20160702.2610e25
+ (optional)_ZNSt6vectorI11IndelAlleleSaIS0_EE12emplace_backIJS0_EEEvDpOT_ at Base 0.0+git20160702.2610e25
  _ZNSt6vectorI11IndelAlleleSaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_ at Base 0.0+git20160702.2610e25
  _ZNSt6vectorI11IndelAlleleSaIS0_EE17_M_realloc_insertIJS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_ at Base 0.0+git20160702.2610e25
  _ZNSt6vectorI11IndelAlleleSaIS0_EED1Ev at Base 0.0+git20160702.2610e25
  _ZNSt6vectorI11IndelAlleleSaIS0_EED2Ev at Base 0.0+git20160702.2610e25
  _ZNSt6vectorISt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4lessIS6_ESaISt4pairIKS6_iEEESaISD_EE12emplace_backIJSD_EEEvDpOT_ at Base 0.0+git20160702.2610e25
- _ZNSt6vectorISt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4lessIS6_ESaISt4pairIKS6_iEEESaISD_EE17_M_realloc_insertIJSD_EEEvN9__gnu_cxx17__normal_iteratorIPSD_SF_EEDpOT_ at Base 0.0+git20160702.2610e25
+ (optional)_ZNSt6vectorISt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4lessIS6_ESaISt4pairIKS6_iEEESaISD_EE17_M_realloc_insertIJSD_EEEvN9__gnu_cxx17__normal_iteratorIPSD_SF_EEDpOT_ at Base 0.0+git20160702.2610e25
  _ZNSt6vectorISt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4lessIS6_ESaISt4pairIKS6_iEEESaISD_EED1Ev at Base 0.0+git20160702.2610e25
  _ZNSt6vectorISt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiSt4lessIS6_ESaISt4pairIKS6_iEEESaISD_EED2Ev at Base 0.0+git20160702.2610e25
  _ZNSt6vectorISt4pairIiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESaIS7_EE12emplace_backIJS7_EEEvDpOT_ at Base 0.0+git20160702.2610e25
@@ -63,13 +63,13 @@ libsmithwaterman.so.0 libsmithwaterman0 #MINVER#
  _ZNSt6vectorISt4pairIiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESaIS7_EED1Ev at Base 0.0+git20160702.2610e25
  _ZNSt6vectorISt4pairIiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESaIS7_EED2Ev at Base 0.0+git20160702.2610e25
  _ZNSt6vectorIfSaIfEE12emplace_backIJfEEEvDpOT_ at Base 0.0+git20160702.2610e25
- _ZNSt6vectorIfSaIfEE17_M_realloc_insertIJfEEEvN9__gnu_cxx17__normal_iteratorIPfS1_EEDpOT_ at Base 0.0+git20160702.2610e25
+ (optional)_ZNSt6vectorIfSaIfEE17_M_realloc_insertIJfEEEvN9__gnu_cxx17__normal_iteratorIPfS1_EEDpOT_ at Base 0.0+git20160702.2610e25
  _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED0Ev at Base 0.0+git20160702.2610e25
  _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED1Ev at Base 0.0+git20160702.2610e25
  _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED2Ev at Base 0.0+git20160702.2610e25
- _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE12_M_erase_auxESt23_Rb_tree_const_iteratorIS8_E at Base 0.0+git20160702.2610e25
- (arch=any-amd64 arm64 mips64el ppc64el hppa ia64 riscv64 sh4 sparc64 x32)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_ at Base 0.0+git20160702.2610e25
- (arch=alpha armel armhf any-i386 mips mipsel s390x powerpc powerpcspe ppc64)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_ at Base 0.0+git20160702.2610e25
+ (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE12_M_erase_auxESt23_Rb_tree_const_iteratorIS8_E at Base 0.0+git20160702.2610e25
+ (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_ at Base 0.0+git20160702.2610e25
+ _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_ at Base 0.0+git20160702.2610e25
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE8_M_eraseEPSt13_Rb_tree_nodeIS8_E at Base 0.0+git20160702.2610e25
  (arch=mips mipsel)_ZSteqIcEN9__gnu_cxx11__enable_ifIXsrSt9__is_charIT_E7__valueEbE6__typeERKNSt7__cxx1112basic_stringIS3_St11char_traitsIS3_ESaIS3_EEESE_ at Base 0.0+git20160702.2610e25
  _ZeqRK11IndelAlleleS1_ at Base 0.0+git20160702.2610e25



View it on GitLab: https://salsa.debian.org/med-team/libsmithwaterman/compare/5d10504dbacee6587a261c6e8a5ec2bb34bef524...8cdb7d6f96bd29e0818da7b96d8bcdb4b02311ff

-- 
View it on GitLab: https://salsa.debian.org/med-team/libsmithwaterman/compare/5d10504dbacee6587a261c6e8a5ec2bb34bef524...8cdb7d6f96bd29e0818da7b96d8bcdb4b02311ff
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