[med-svn] [Git][med-team/python-pybedtools][master] Rounded-up self-description of package.

[Steffen Möller]

Hello,

in my attempt to turn "yellow" packages into "green", I came across
pybedtools. Only when I was about to upload I had noticed that this
package was in the distribution before and then removed
(https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=894299).

I am not exactly sure about what the reason for the removal was, but
either way, should we possibly separate such removed packages on our
task list, possibly?

Best,

Steffen

On 6/13/18 10:43 PM, Steffen Möller wrote:
> GitLab
>
>
>       Steffen Möller pushed to branch master at Debian Med /
>       python-pybedtools
>       <https://salsa.debian.org/med-team/python-pybedtools>
>
>
>         Commits:
>
>   * *ce993d6f
>     <https://salsa.debian.org/med-team/python-pybedtools/commit/ce993d6f1af7f4083075c276eaf0e3e4175a36b4>*
>
>     by Steffen Moeller /at 2018-06-13T22:43:12+02:00/
>     Rounded-up self-description of package.
>
>
>         3 changed files:
>
>   * debian/changelog <#9c96da0e9f91d7d8937b69b524702c106258f0d1>
>   * debian/control <#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2>
>   * debian/upstream/metadata <#f5606a935d95a2f20059a7ac1136f47b2edadbf6>
>
>
>         Changes:
>
> # *debian/changelog*
> <https://salsa.debian.org/med-team/python-pybedtools/commit/ce993d6f1af7f4083075c276eaf0e3e4175a36b4#9c96da0e9f91d7d8937b69b524702c106258f0d1>
>
> ------------------------------------------------------------------------
>
> 	1 	
> +python-pybedtools (0.7.10-2.1) REMOVED; urgency=medium
>
> 	2 	
> +
>
> 	3 	
> +* Removed from unstable and testing, see
>
> 	4 	
> +https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=894299
>
> 	5 	
> +
>
> 	6 	
> +-- Steffen Moeller <moeller at debian.org> Wed, 13 Jun 2018 22:40:23 +0200
>
> 	7 	
> +
> 1 	8 	
>  python-pybedtools (0.7.10-2) unstable; urgency=medium
> 2 	9 	
>  
> 3 	10 	
>  * Team upload
>
>
> # *debian/control*
> <https://salsa.debian.org/med-team/python-pybedtools/commit/ce993d6f1af7f4083075c276eaf0e3e4175a36b4#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2>
>
> ------------------------------------------------------------------------
> 1 	1 	
>  Source: python-pybedtools
> 2 	2 	
>  Maintainer: Debian Med Packaging Team
> <debian-med-packaging at lists.alioth.debian.org>
> 3 	
> 	
> -Uploaders: Michael R. Crusoe <michael.crusoe at gmail.com>
>
> 	3 	
> +Uploaders: Michael R. Crusoe <michael.crusoe at gmail.com>,
>
> 	4 	
> +Steffen Moeller <moeller at debian.org>
> 4 	5 	
>  Section: python
> 5 	6 	
>  Priority: optional
> 6 	7 	
>  Build-Depends: debhelper (>= 10),
> ... 	... 	@@ -21,7 +22,7 @@ Build-Depends: debhelper (>= 10),
> 21 	22 	
>  cython,
> 22 	23 	
>  r-base-core,
> 23 	24 	
>  zlib1g-dev
> 24 	
> 	
> -Standards-Version: 4.1.1
>
> 	25 	
> +Standards-Version: 4.1.4
> 25 	26 	
>  Vcs-Browser:
> https://anonscm.debian.org/cgit/debian-med/python-pybedtools.git
> 26 	27 	
>  Vcs-Git: https://anonscm.debian.org/git/debian-med/python-pybedtools.git
> 27 	28 	
>  Homepage: https://daler.github.io/pybedtools/
>
>
> # *debian/upstream/metadata*
> <https://salsa.debian.org/med-team/python-pybedtools/commit/ce993d6f1af7f4083075c276eaf0e3e4175a36b4#f5606a935d95a2f20059a7ac1136f47b2edadbf6>
>
> ------------------------------------------------------------------------
> 1 	1 	
>  Name: pybedtools
> 2 	2 	
>  Reference:
> 3 	
> 	
> -- Author: R. K. Dale and B. S. Pedersen and A. R. Quinlan
> 4 	
> 	
> -Title: "Pybedtools: a flexible Python library for manipulating genomic
> datasets and
> 5 	
> 	
> -annotations"
> 6 	
> 	
> -Journal: Bioinformatics
> 7 	
> 	
> -Publisher: Oxford University Press (OUP)
> 8 	
> 	
> -Volume: 27
> 9 	
> 	
> -Number: 24
> 10 	
> 	
> -Pages: 3423-3424
> 11 	
> 	
> -Year: 2011
> 12 	
> 	
> -Month: sep
> 13 	
> 	
> -DOI: 10.1093/bioinformatics/btr539
> 14 	
> 	
> -URL: https://doi.org/10.1093%2Fbioinformatics%2Fbtr539
> 15 	
> 	
> -Type: article
>
> 	3 	
> +- Author: R. K. Dale and B. S. Pedersen and A. R. Quinlan
>
> 	4 	
> +Title: >
>
> 	5 	
> +Pybedtools: a flexible Python library for manipulating genomic
>
> 	6 	
> +datasets and annotations"
>
> 	7 	
> +Journal: Bioinformatics
>
> 	8 	
> +Publisher: Oxford University Press (OUP)
>
> 	9 	
> +Volume: 27
>
> 	10 	
> +Number: 24
>
> 	11 	
> +Pages: 3423-3424
>
> 	12 	
> +Year: 2011
>
> 	13 	
> +Month: sep
>
> 	14 	
> +DOI: 10.1093/bioinformatics/btr539
>
> 	15 	
> +URL: https://doi.org/10.1093%2Fbioinformatics%2Fbtr539
>
> 	16 	
> +Type: article
>
> 	17 	
> +Registry:
>
> 	18 	
> +- Name: bio.tools
>
> 	19 	
> +Entry: pybedtools
>
> 	20 	
> +- Name: SciCrunch
>
> 	21 	
> +Entry: NA
>
> 	22 	
> +- Name: OMICtools
>
> 	23 	
> +Entry: OMICS_09508
>
>
> —
> View it on GitLab
> <https://salsa.debian.org/med-team/python-pybedtools/commit/ce993d6f1af7f4083075c276eaf0e3e4175a36b4>.
>
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