[med-svn] [Git][med-team/pbseqlib][upstream] New upstream version 5.3.1+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / pbseqlib


Commits:
004f0d13 by Andreas Tille at 2018-06-26T08:49:25+02:00
New upstream version 5.3.1+dfsg
- - - - -


19 changed files:

- + .clang-format
- .gitignore
- + .gitmodules
- + CMakeLists.txt
- + DEVELOPER.md
- README.md
- alignment/MappingMetrics.cpp
- alignment/MappingMetrics.hpp
- alignment/algorithms/alignment/AffineGuidedAlign.hpp
- alignment/algorithms/alignment/AffineKBandAlign.hpp
- alignment/algorithms/alignment/AlignmentFormats.hpp
- alignment/algorithms/alignment/AlignmentUtils.cpp
- alignment/algorithms/alignment/AlignmentUtils.hpp
- alignment/algorithms/alignment/AlignmentUtilsImpl.hpp
- alignment/algorithms/alignment/BaseScoreFunction.cpp
- alignment/algorithms/alignment/BaseScoreFunction.hpp
- alignment/algorithms/alignment/DistanceMatrixScoreFunction.hpp
- alignment/algorithms/alignment/DistanceMatrixScoreFunctionImpl.hpp
- alignment/algorithms/alignment/ExtendAlign.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/pbseqlib/commit/004f0d13f1776a8ff54dfe69c753c1f50bea18d0

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View it on GitLab: https://salsa.debian.org/med-team/pbseqlib/commit/004f0d13f1776a8ff54dfe69c753c1f50bea18d0
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