[med-svn] [Git][med-team/libseqlib][master] 2 commits: Add missing -lz to pkg-config for linking with zlib

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / libseqlib


Commits:
459a0118 by Andreas Tille at 2018-03-17T10:51:41+01:00
Add missing -lz to pkg-config for linking with zlib

- - - - -
75c30508 by Andreas Tille at 2018-03-17T12:09:35+01:00
Upload to unstable

- - - - -


3 changed files:

- debian/changelog
- debian/patches/pkg-config.patch
- debian/patches/use_private_htslib_headers.patch


Changes:

=====================================
debian/changelog
=====================================
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,11 @@
+libseqlib (1.1.1+dfsg-5) unstable; urgency=medium
+
+  [ Adam Conrad ]
+  * Add missing -lz to pkg-config for linking with zlib
+    Closes: #893192
+
+ -- Andreas Tille <tille at debian.org>  Sat, 17 Mar 2018 10:51:57 +0100
+
 libseqlib (1.1.1+dfsg-4) unstable; urgency=medium
 
   * Make sure also private headers of htslib will be installed and usable


=====================================
debian/patches/pkg-config.patch
=====================================
--- a/debian/patches/pkg-config.patch
+++ b/debian/patches/pkg-config.patch
@@ -13,7 +13,7 @@ Description: Add pkg-config file
 +Name: libseqlib
 +Version: @VERSION@
 +Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data
-+Libs: -L${libdir} -lseqlib -lfml -lbwa -lssw
++Libs: -L${libdir} -lseqlib -lfml -lbwa -lssw -lz
 +Cflags: -I${includedir}
 +
 --- a/Makefile.am


=====================================
debian/patches/use_private_htslib_headers.patch
=====================================
--- a/debian/patches/use_private_htslib_headers.patch
+++ b/debian/patches/use_private_htslib_headers.patch
@@ -21,7 +21,7 @@ Description: Hack around improper use of private files of htslib
 @@ -7,5 +7,5 @@ Name: libseqlib
  Version: @VERSION@
  Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data
- Libs: -L${libdir} -lseqlib -lfml -lbwa -lssw
+ Libs: -L${libdir} -lseqlib -lfml -lbwa -lssw -lz
 -Cflags: -I${includedir}
 +Cflags: -I${includedir} -I/usr/include/htslib
  



View it on GitLab: https://salsa.debian.org/med-team/libseqlib/compare/d15d15945f046b947d4218719ae56fede19eaa44...75c30508b207a1a796616fd42385d8494f9b0757

---
View it on GitLab: https://salsa.debian.org/med-team/libseqlib/compare/d15d15945f046b947d4218719ae56fede19eaa44...75c30508b207a1a796616fd42385d8494f9b0757
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