[med-svn] [Git][med-team/diamond-aligner][master] 3 commits: New upstream version 0.9.19+dfsg

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / diamond-aligner


Commits:
77a1d2eb by Andreas Tille at 2018-03-29T09:36:48+02:00
New upstream version 0.9.19+dfsg
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dfca40a2 by Andreas Tille at 2018-03-29T09:36:49+02:00
Update upstream source from tag 'upstream/0.9.19+dfsg'

Update to upstream version '0.9.19+dfsg'
with Debian dir bc5439d20f26c43f4b7f6363fec2b31c10f24eef
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7732064d by Andreas Tille at 2018-03-29T09:37:37+02:00
New upstream version

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30 changed files:

- CMakeLists.txt
- README.rst
- build_simple.sh
- debian/changelog
- src/ChangeLog
- src/align/align.cpp
- src/align/align.h
- src/align/banded_swipe_pipeline.cpp
- src/align/query_mapper.cpp
- src/align/query_mapper.h
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/hssp.cpp
- src/basic/match.h
- + src/basic/parameters.h
- src/basic/score_matrix.cpp
- src/basic/score_matrix.h
- src/basic/sequence.h
- src/data/load_seqs.h
- + src/data/metadata.h
- src/data/queries.cpp
- src/data/queries.h
- + src/data/ref_dictionary.cpp
- + src/data/ref_dictionary.h
- src/data/reference.cpp
- src/data/reference.h
- src/data/seed_histogram.h
- src/data/seed_set.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/compare/2127b9913c255b5c9fc4fe348db62e9d4e372c88...7732064d7819472388bd28cf5af160f159986806

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View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/compare/2127b9913c255b5c9fc4fe348db62e9d4e372c88...7732064d7819472388bd28cf5af160f159986806
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