[med-svn] [Git][med-team/diamond-aligner][upstream] New upstream version 0.9.19+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / diamond-aligner


Commits:
77a1d2eb by Andreas Tille at 2018-03-29T09:36:48+02:00
New upstream version 0.9.19+dfsg
- - - - -


30 changed files:

- CMakeLists.txt
- README.rst
- build_simple.sh
- src/ChangeLog
- src/align/align.cpp
- src/align/align.h
- src/align/banded_swipe_pipeline.cpp
- src/align/query_mapper.cpp
- src/align/query_mapper.h
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/hssp.cpp
- src/basic/match.h
- + src/basic/parameters.h
- src/basic/score_matrix.cpp
- src/basic/score_matrix.h
- src/basic/sequence.h
- src/data/load_seqs.h
- + src/data/metadata.h
- src/data/queries.cpp
- src/data/queries.h
- + src/data/ref_dictionary.cpp
- + src/data/ref_dictionary.h
- src/data/reference.cpp
- src/data/reference.h
- src/data/seed_histogram.h
- src/data/seed_set.cpp
- src/data/seed_set.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/commit/77a1d2ebea51bfbd5b1b0dcc5df8aede05c1f62f

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