[med-svn] [Git][med-team/salmon][master] further work on building 0.8

[Sascha Steinbiss]

Sascha Steinbiss pushed to branch master at Debian Med / salmon


Commits:
3b03eb19 by Sascha Steinbiss at 2018-05-09T11:34:07+02:00
further work on building 0.8

- - - - -


30 changed files:

- debian/changelog
- debian/control
- debian/patches/0008-Remove-salmon_core-lib.patch
- debian/patches/series
- + debian/patches/temporarily-disable-test.patch
- debian/rapmap/BooMap.hpp
- debian/rapmap/BooPHF.hpp
- + debian/rapmap/Const.hpp
- + debian/rapmap/EnumCoder.hpp
- + debian/rapmap/FastxParser.hpp
- + debian/rapmap/FrugalBooMap.hpp
- debian/rapmap/HitManager.hpp
- debian/rapmap/IndexHeader.hpp
- debian/rapmap/JFRaw.hpp
- debian/rapmap/PairAlignmentFormatter.hpp
- + debian/rapmap/PairSequenceParser.hpp
- debian/rapmap/RapMapConfig.hpp
- debian/rapmap/RapMapFileSystem.hpp
- debian/rapmap/RapMapIndex.hpp
- debian/rapmap/RapMapSAIndex.hpp
- debian/rapmap/RapMapUtils.hpp
- debian/rapmap/SACollector.hpp
- debian/rapmap/SASearcher.hpp
- debian/rapmap/ScopedTimer.hpp
- debian/rapmap/SingleAlignmentFormatter.hpp
- + debian/rapmap/SparseHashSerializer.hpp
- debian/rapmap/SpinLock.hpp
- + debian/rapmap/Type.hpp
- + debian/rapmap/Util.hpp
- + debian/rapmap/bar.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/salmon/commit/3b03eb1943d4e4b77e2c8c2f870d8d6c54e4df74

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View it on GitLab: https://salsa.debian.org/med-team/salmon/commit/3b03eb1943d4e4b77e2c8c2f870d8d6c54e4df74
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