[med-svn] [Git][med-team/megan-ce][upstream] New upstream version 0.0+git20180524.24e70bf

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / megan-ce


Commits:
ce42df64 by Andreas Tille at 2018-05-26T23:39:44+02:00
New upstream version 0.0+git20180524.24e70bf
- - - - -


30 changed files:

- antbuild/build.xml
- resources/css/notificationpopup.css
- resources/css/samplesviewer.css
- resources/files/eggnog.map
- resources/files/ncbi.info
- resources/files/ncbi.map
- resources/files/ncbi.tre
- resources/images/megan6.png
- resources/log4j.properties
- src/log4j.properties
- src/megan/algorithms/ActiveMatches.java
- src/megan/algorithms/AssignmentUsingBestHit.java
- src/megan/algorithms/AssignmentUsingBestHitCreator.java
- − src/megan/algorithms/AssignmentUsingCoverageBasedLCA.java
- + src/megan/algorithms/AssignmentUsingIntervalUnionLCA.java
- src/megan/algorithms/AssignmentUsingCoverageBasedLCACreator.java → src/megan/algorithms/AssignmentUsingIntervalUnionLCACreator.java
- src/megan/algorithms/AssignmentUsingLCA.java
- src/megan/algorithms/AssignmentUsingLCACreator.java
- src/megan/algorithms/AssignmentUsingLCAForTaxonomy.java
- src/megan/algorithms/AssignmentUsingLCAForTaxonomyCreator.java
- src/megan/algorithms/AssignmentUsingMultiGeneBestHit.java
- src/megan/algorithms/AssignmentUsingMultiGeneBestHitCreator.java
- + src/megan/algorithms/AssignmentUsingSegmentLCA.java
- src/megan/algorithms/AssignmentUsingWeightedLCA.java
- src/megan/algorithms/AssignmentUsingWeightedLCACreator.java
- + src/megan/algorithms/ChimericCheck.java
- src/megan/algorithms/DataProcessor.java
- + src/megan/algorithms/DataProcessorParallel.java
- src/megan/algorithms/IAssignmentAlgorithm.java
- src/megan/algorithms/IAssignmentAlgorithmCreator.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/megan-ce/commit/ce42df640c31b33afdbc41d18475ab0396c1347d

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View it on GitLab: https://salsa.debian.org/med-team/megan-ce/commit/ce42df640c31b33afdbc41d18475ab0396c1347d
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