[med-svn] [Git][med-team/canu][master] 8 commits: New upstream version 1.8+dfsg

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / canu


Commits:
3557203b by Andreas Tille at 2018-11-01T07:39:45Z
New upstream version 1.8+dfsg
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2d2b0f7f by Andreas Tille at 2018-11-01T07:39:52Z
Update upstream source from tag 'upstream/1.8+dfsg'

Update to upstream version '1.8+dfsg'
with Debian dir 6698b0548a640a64423d4cf680d5cce4de247980
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955ee151 by Andreas Tille at 2018-11-01T07:39:52Z
New upstream version

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fb7c44fc by Andreas Tille at 2018-11-01T07:39:55Z
Standards-Version: 4.2.1

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a1a69c88 by Andreas Tille at 2018-11-01T07:43:58Z
Adapt patches

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1e914040 by Andreas Tille at 2018-11-01T07:54:40Z
Remove unused paragraphs in d/copyright

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2c3ca72b by Andreas Tille at 2018-11-01T07:56:10Z
Fix perl interpreter path

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2a7ce1b0 by Andreas Tille at 2018-11-01T08:02:04Z
Upload to unstable

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30 changed files:

- addCopyrights-BuildData.pl
- addCopyrights.dat
- addCopyrights.pl
- buildRelease.sh
- debian/changelog
- debian/control
- debian/copyright
- debian/patches/external-mhap.patch
- − debian/patches/gcc-7_format-security.patch
- debian/patches/series
- debian/patches/use-debian-mhap-at-runtime.patch
- debian/rules
- + documentation/source/canu-pipeline-17.svg
- + documentation/source/canu-pipeline-20.svg
- documentation/source/commands/bogart.rst
- documentation/source/commands/canu.rst
- documentation/source/commands/overlapInCore.rst
- documentation/source/commands/splitReads.rst
- documentation/source/conf.py
- documentation/source/faq.rst
- documentation/source/history.rst
- documentation/source/index.rst
- documentation/source/parameter-reference.rst
- documentation/source/quick-start.rst
- documentation/source/tutorial.rst
- − src/AS_UTL/AS_UTL_decodeRange.C
- − src/AS_UTL/AS_UTL_decodeRange.H
- − src/AS_UTL/AS_UTL_fasta.C
- − src/AS_UTL/AS_UTL_reverseComplement.C
- − src/AS_UTL/bitEncodings.C


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/canu/compare/b0bd43c00403591d5484a22a0d23e960204e8fad...2a7ce1b0073b465dbf14e3b40626209efe25dde8

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View it on GitLab: https://salsa.debian.org/med-team/canu/compare/b0bd43c00403591d5484a22a0d23e960204e8fad...2a7ce1b0073b465dbf14e3b40626209efe25dde8
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