[med-svn] [Git][med-team/ariba][upstream] New upstream version 2.13.1+ds

[Sascha Steinbiss]

Sascha Steinbiss pushed to branch upstream at Debian Med / ariba


Commits:
60af3c31 by Sascha Steinbiss at 2018-11-21T15:29:30Z
New upstream version 2.13.1+ds
- - - - -


30 changed files:

- .travis.yml
- README.md
- + _config.yml
- ariba/__init__.py
- ariba/assembly.py
- ariba/cdhit.py
- ariba/cluster.py
- ariba/clusters.py
- ariba/common.py
- ariba/megares_zip_parser.py
- ariba/mic_plotter.py
- ariba/mlst_reporter.py
- ariba/pubmlst_getter.py
- ariba/read_filter.py
- ariba/ref_genes_getter.py
- ariba/ref_preparer.py
- ariba/ref_seq_chooser.py
- ariba/reference_data.py
- ariba/report_flag_expander.py
- ariba/summary_cluster.py
- ariba/tasks/__init__.py
- + ariba/tasks/prepareref_tb.py
- + ariba/tb.py
- + ariba/tb_data/NC_000962.3.fa.gz
- + ariba/tb_data/NC_000962.3.gb
- + ariba/tb_data/panel.20181115.json
- + ariba/tb_data/panel.20181115.txt
- ariba/tests/assembly_test.py
- ariba/tests/cluster_test.py
- ariba/tests/clusters_test.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/ariba/commit/60af3c31a8157af76f659adb06c6d5a6907c6020

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