[med-svn] [Git][med-team/augustus][upstream] New upstream version 3.3.2+dfsg

[Sascha Steinbiss]

Sascha Steinbiss pushed to branch upstream at Debian Med / augustus


Commits:
faf2de90 by Sascha Steinbiss at 2018-10-06T12:12:35Z
New upstream version 3.3.2+dfsg
- - - - -


30 changed files:

- + .gitignore
- + .travis.yml
- + Dockerfile
- HISTORY.TXT
- Makefile
- README-cgp.txt
- − README.TXT
- + README.md
- auxprogs/aln2wig/Makefile
- auxprogs/aln2wig/aln2wig.c
- auxprogs/auxBamFilters/README
- auxprogs/auxBamFilters/eg1.s.bam
- auxprogs/auxBamFilters/eg2.bam
- auxprogs/auxBamFilters/operation_H_filter.txt
- auxprogs/auxBamFilters/operation_N_filter.txt
- auxprogs/auxBamFilters/toyAlignments.bam
- auxprogs/bam2wig/Makefile
- auxprogs/checkTargetSortedness/Makefile
- auxprogs/checkTargetSortedness/checkTargetSortedness.c
- auxprogs/compileSpliceCands/Makefile
- auxprogs/compileSpliceCands/chr21.fa
- auxprogs/compileSpliceCands/compileSpliceCands.c
- auxprogs/compileSpliceCands/list.c
- auxprogs/compileSpliceCands/list.h
- auxprogs/compileSpliceCands/out.gff
- auxprogs/filterBam/README
- auxprogs/filterBam/src/bamtools/LICENSE
- auxprogs/filterBam/src/bamtools/bamtools_sort.h
- auxprogs/filterBam/src/bamtools/bamtools_tool.h
- auxprogs/filterBam/src/filterBam.cc


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/augustus/commit/faf2de9015a2aca3fcc4e0fccf6a4a2142cf6d13

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View it on GitLab: https://salsa.debian.org/med-team/augustus/commit/faf2de9015a2aca3fcc4e0fccf6a4a2142cf6d13
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