[med-svn] [Git][med-team/consensuscore][upstream] New upstream version 1.1.1+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / consensuscore


Commits:
599a641b by Andreas Tille at 2018-10-09T15:42:08Z
New upstream version 1.1.1+dfsg
- - - - -


30 changed files:

- + .clang-format
- .gitignore
- Makefile
- README.md
- + bamboo_build.sh
- configure
- + external/meson.build
- include/ConsensusCore/Align/AffineAlignment.hpp
- include/ConsensusCore/Align/AlignConfig.hpp
- include/ConsensusCore/Align/LinearAlignment.hpp
- include/ConsensusCore/Align/PairwiseAlignment.hpp
- include/ConsensusCore/Checksum.hpp
- include/ConsensusCore/Coverage.hpp
- include/ConsensusCore/Edna/EdnaConfig.hpp
- include/ConsensusCore/Edna/EdnaCounts.hpp
- include/ConsensusCore/Edna/EdnaEvaluator.hpp
- include/ConsensusCore/Feature.hpp
- include/ConsensusCore/Features.hpp
- include/ConsensusCore/Interval.hpp
- include/ConsensusCore/LFloat.hpp
- include/ConsensusCore/Logging.hpp
- include/ConsensusCore/Matrix/AbstractMatrix.hpp
- include/ConsensusCore/Matrix/DenseMatrix-inl.hpp
- include/ConsensusCore/Matrix/DenseMatrix.hpp
- include/ConsensusCore/Matrix/SparseMatrix-inl.hpp
- include/ConsensusCore/Matrix/SparseMatrix.hpp
- include/ConsensusCore/Matrix/SparseVector-inl.hpp
- include/ConsensusCore/Matrix/SparseVector.hpp
- include/ConsensusCore/Matrix/VectorL.hpp
- include/ConsensusCore/Mutation-inl.hpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/consensuscore/commit/599a641b14538b93c596ecd19efd6be6570dbc39

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View it on GitLab: https://salsa.debian.org/med-team/consensuscore/commit/599a641b14538b93c596ecd19efd6be6570dbc39
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