[med-svn] [Git][med-team/spades][upstream] New upstream version 3.13.0+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / spades


Commits:
67452d60 by Andreas Tille at 2018-10-16T18:45:31Z
New upstream version 3.13.0+dfsg
- - - - -


30 changed files:

- LICENSE
- − README
- manual.md → README.md
- VERSION
- changelog.html
- − configs/debruijn/diploid_mode.info
- configs/debruijn/log.properties
- − configs/dipspades/config.info
- − configs/dipspades/log.properties
- − dipspades.py
- − dipspades_manual.html
- ext/include/bwa/bntseq.h
- ext/include/bwa/bwa.h
- ext/include/bwa/bwamem.h
- + ext/include/bwa/rle.h
- + ext/include/bwa/rope.h
- ext/src/gfa1/gfa.c
- manual.html
- metaspades.py
- plasmidspades.py
- rnaspades.py
- rnaspades_manual.html
- spades.py
- src/CMakeLists.txt
- src/cmake/pack.cmake
- src/common/adt/cqf.hpp
- src/common/adt/cyclichash.hpp
- src/common/assembly_graph/construction/debruijn_graph_constructor.hpp
- src/common/assembly_graph/paths/bidirectional_path_io/io_support.cpp
- src/common/assembly_graph/paths/bidirectional_path_io/io_support.hpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/spades/commit/67452d60c12456078ee95292a51ff0a20a3a3810

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View it on GitLab: https://salsa.debian.org/med-team/spades/commit/67452d60c12456078ee95292a51ff0a20a3a3810
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