[med-svn] [Git][med-team/sspace][master] 7 commits: debhelper 11

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / sspace


Commits:
3ab92104 by Andreas Tille at 2018-10-19T07:56:48Z
debhelper 11

- - - - -
bb3388cd by Andreas Tille at 2018-10-19T07:57:26Z
Point Vcs fields to salsa.debian.org

- - - - -
c2474ea1 by Andreas Tille at 2018-10-19T07:57:26Z
Standards-Version: 4.2.1

- - - - -
3057fbcf by Andreas Tille at 2018-10-19T08:17:36Z
Secure URI in copyright format

- - - - -
360f69ff by Andreas Tille at 2018-10-19T09:15:39Z
Respect DEB_BUILD_OPTIONS in override_dh_auto_test

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7b7ad325 by Andreas Tille at 2018-10-19T09:16:57Z
Fix perl interpreter

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d12ee449 by Andreas Tille at 2018-10-19T09:18:59Z
Upload to unstable

- - - - -


5 changed files:

- debian/changelog
- debian/compat
- debian/control
- debian/copyright
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,14 @@
+sspace (2.1.1+dfsg-4) unstable; urgency=medium
+
+  * debhelper 11
+  * Point Vcs fields to salsa.debian.org
+  * Standards-Version: 4.2.1
+  * Secure URI in copyright format
+  * Respect DEB_BUILD_OPTIONS in override_dh_auto_test
+  * Fix perl interpreter
+
+ -- Andreas Tille <tille at debian.org>  Fri, 19 Oct 2018 11:17:15 +0200
+
 sspace (2.1.1+dfsg-3) unstable; urgency=medium
 
   * Allow stderr output in autopkgtest.


=====================================
debian/compat
=====================================
@@ -1 +1 @@
-9
+11


=====================================
debian/control
=====================================
@@ -4,14 +4,14 @@ Uploaders: Andreas Tille <tille at debian.org>,
            Sascha Steinbiss <satta at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 9),
+Build-Depends: debhelper (>= 11~),
                recode,
                python,
                asciidoctor,
                bowtie
-Standards-Version: 4.1.1
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/sspace.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/sspace.git
+Standards-Version: 4.2.1
+Vcs-Browser: https://salsa.debian.org/med-team/sspace
+Vcs-Git: https://salsa.debian.org/med-team/sspace.git
 Homepage: https://github.com/nsoranzo/sspace_basic
 
 Package: sspace


=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: SSPACE_basic
 Upstream-Contact: Nicola Soranzo <nicola.soranzo at tgac.ac.uk>
 Source: https://github.com/nsoranzo/sspace_basic/releases


=====================================
debian/rules
=====================================
@@ -15,8 +15,14 @@ override_dh_install:
 	chmod -x debian/sspace/usr/share/sspace/tools/TRIMMING_PAIRED_READS.README \
 	         debian/sspace/usr/share/sspace/tools/TQS.readme \
 	         debian/sspace/usr/share/sspace/dotlib/DotLib.pm
+	for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \
+	    sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' $${pl} ; \
+	done
+
 override_dh_auto_test:
+ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
 	debian/tests/example-tests $(CURDIR)/SSPACE_Basic.pl
+endif
 
 override_dh_installexamples:
 	dh_installexamples



View it on GitLab: https://salsa.debian.org/med-team/sspace/compare/4b098a2f5d6d6953d690a57ff9b395ce07f03426...d12ee449039406d66c96097c5ff5c72f94fdc3ed

-- 
View it on GitLab: https://salsa.debian.org/med-team/sspace/compare/4b098a2f5d6d6953d690a57ff9b395ce07f03426...d12ee449039406d66c96097c5ff5c72f94fdc3ed
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