[med-svn] [Git][med-team/bwa][master] 6 commits: debhelper 11

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / bwa


Commits:
2b5e368f by Andreas Tille at 2018-10-19T13:01:21Z
debhelper 11

- - - - -
f08a8824 by Andreas Tille at 2018-10-19T13:01:23Z
Point Vcs fields to salsa.debian.org

- - - - -
db8bb6ba by Andreas Tille at 2018-10-19T13:01:23Z
Standards-Version: 4.2.1

- - - - -
0bc4e31c by Andreas Tille at 2018-10-19T13:01:23Z
Secure URI in copyright format

- - - - -
5f87b9d3 by Andreas Tille at 2018-10-19T13:05:02Z
Fix wrong-path-for-interpreter

- - - - -
954f787d by Andreas Tille at 2018-10-19T13:06:28Z
Upload to unstable

- - - - -


5 changed files:

- debian/changelog
- debian/compat
- debian/control
- debian/copyright
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+bwa (0.7.17-2) unstable; urgency=medium
+
+  * debhelper 11
+  * Point Vcs fields to salsa.debian.org
+  * Standards-Version: 4.2.1
+  * Secure URI in copyright format
+  * Fix wrong-path-for-interpreter
+
+ -- Andreas Tille <tille at debian.org>  Fri, 19 Oct 2018 15:05:09 +0200
+
 bwa (0.7.17-1) unstable; urgency=medium
 
   * debian/upstream/metadata: RRID -> SciCrunch


=====================================
debian/compat
=====================================
@@ -1 +1 @@
-10
+11


=====================================
debian/control
=====================================
@@ -7,11 +7,11 @@ Uploaders: Charles Plessy <plessy at debian.org>,
            Michael R. Crusoe <crusoe at ucdavis.edu>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 10),
+Build-Depends: debhelper (>= 11~),
                zlib1g-dev
-Standards-Version: 4.1.1
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/bwa.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/bwa.git
+Standards-Version: 4.2.1
+Vcs-Browser: https://salsa.debian.org/med-team/bwa
+Vcs-Git: https://salsa.debian.org/med-team/bwa.git
 Homepage: http://bio-bwa.sourceforge.net/
 
 Package: bwa


=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Contact: Heng Li <lh3 at sanger.ac.uk>,
                   https://lists.sourceforge.net/lists/listinfo/bio-bwa-help
 Upstream-Name: Burrows-Wheeler Aligner


=====================================
debian/rules
=====================================
@@ -18,3 +18,9 @@ override_dh_auto_build:
 
 override_dh_installchangelogs:
 	dh_installchangelogs NEWS.md
+
+override_dh_install:
+	dh_install
+	for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \
+	    sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' $${pl} ; \
+	done



View it on GitLab: https://salsa.debian.org/med-team/bwa/compare/7ffeaaeda7f9c6ebb06619f69895fc2bd3ca8cc7...954f787db2aab114c17230acb1be4e1ad9c53f6f

-- 
View it on GitLab: https://salsa.debian.org/med-team/bwa/compare/7ffeaaeda7f9c6ebb06619f69895fc2bd3ca8cc7...954f787db2aab114c17230acb1be4e1ad9c53f6f
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