[med-svn] [Git][med-team/python-pbcommand][upstream] New upstream version 1.1.1

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / python-pbcommand


Commits:
78dd1b09 by Andreas Tille at 2018-10-31T11:56:10Z
New upstream version 1.1.1
- - - - -


30 changed files:

- Makefile
- README.md
- REQUIREMENTS.txt
- REQUIREMENTS_TEST.txt
- + bamboo_build.sh
- circle.yml
- docs/source/conf.py
- + docs/source/cookbook_services.ipynb
- docs/source/index.rst
- docs/source/pbcommand.services.rst
- + extras/make_cpp_file_types_header.py
- pbcommand/__init__.py
- pbcommand/cli/core.py
- pbcommand/cli/examples/dev_gather_fasta_app.py
- pbcommand/cli/examples/dev_mixed_app.py
- pbcommand/cli/examples/dev_quick_hello_world.py
- + pbcommand/cli/examples/template_subparser_simple.py
- pbcommand/cli/quick.py
- pbcommand/engine/runner.py
- pbcommand/interactive_resolver.py
- pbcommand/models/common.py
- pbcommand/models/parser.py
- pbcommand/models/report.py
- pbcommand/models/tool_contract.py
- pbcommand/pb_io/common.py
- pbcommand/pb_io/report.py
- pbcommand/pb_io/tool_contract_io.py
- pbcommand/schemas/__init__.py
- pbcommand/schemas/pbreport.avsc
- pbcommand/schemas/pipeline_presets.avsc


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-pbcommand/commit/78dd1b095197adef5eb3abfef4b50f0077e8b530

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