[med-svn] [Git][med-team/tnseq-transit][upstream] New upstream version 2.2.1

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / tnseq-transit


Commits:
d1480d40 by Andreas Tille at 2018-09-26T19:00:57Z
New upstream version 2.2.1
- - - - -


30 changed files:

- README.md
- VERSION
- setup.py
- src/pytpp/__main__.py
- src/pytransit/__init__.py
- src/pytransit/__main__.py
- src/pytransit/analysis/__init__.py
- src/pytransit/analysis/base.py
- src/pytransit/analysis/binomial.py
- src/pytransit/analysis/example.py
- + src/pytransit/analysis/gi.py
- src/pytransit/analysis/griffin.py
- src/pytransit/analysis/gumbel.py
- src/pytransit/analysis/hmm.py
- src/pytransit/analysis/norm.py
- src/pytransit/analysis/rankproduct.py
- src/pytransit/analysis/resampling.py
- src/pytransit/analysis/tn5gaps.py
- + src/pytransit/analysis/utest.py
- − src/pytransit/data/gumbel_glycerol_reads_rep1_s10000_b500_t1.dat
- − src/pytransit/data/hmm_glycerol_sites.dat
- − src/pytransit/data/hmm_glycerol_sites_genes.dat
- − src/pytransit/data/resampling_results_glyc_chol.dat
- − src/pytransit/doc/Makefile
- − src/pytransit/doc/images/tutorial_glyc_ctrl.png
- − src/pytransit/doc/make.bat
- − src/pytransit/doc/source/Makefile
- src/pytransit/doc/images/export_menu.png → src/pytransit/doc/source/_images/export_menu.png
- src/pytransit/doc/images/files_list.png → src/pytransit/doc/source/_images/files_list.png
- src/pytransit/doc/images/gumbel_g0g1.png → src/pytransit/doc/source/_images/gumbel_g0g1.png


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/tnseq-transit/commit/d1480d4097d72562b2c52e27aa0b0227ea44db9c

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