[med-svn] [Git][med-team/kissplice][master] 2 commits: Add autopkgtests

[Saira Hussain]

Saira Hussain pushed to branch master at Debian Med / kissplice


Commits:
b0e216fa by Saira Hussain at 2019-08-12T11:21:32Z
Add autopkgtests

- - - - -
a2cbd36a by Saira Hussain at 2019-08-12T11:21:50Z
Delete unused file

- - - - -


4 changed files:

- debian/changelog
- + debian/sample_example
- + debian/tests/control
- + debian/tests/run-unit-tests


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+kissplice (2.4.0-p1-5) UNRELEASED; urgency=medium
+
+  * Team upload.
+
+  [ Saira Hussain ]
+  * Add autopkgtest
+
+ -- Saira Hussain <saira.h0213 at zoho.com>  Mon, 12 Aug 2019 12:07:18 +0100
+
 kissplice (2.4.0-p1-4) unstable; urgency=medium
 
   [ Jelmer Vernooij ]


=====================================
debian/sample_example
=====================================
@@ -0,0 +1 @@
+sample_example/*


=====================================
debian/tests/control
=====================================
@@ -0,0 +1,3 @@
+Tests: run-unit-tests
+Depends: @
+Restrictions: allow-stderr


=====================================
debian/tests/run-unit-tests
=====================================
@@ -0,0 +1,23 @@
+#!/bin/bash
+set -e
+
+pkg=kissplice
+
+if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
+  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
+  # Double quote below to expand the temporary directory variable now versus
+  # later is on purpose.
+  # shellcheck disable=SC2064
+#  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
+fi
+
+cp /usr/share/doc/${pkg}/examples/* -a "${AUTOPKGTEST_TMP}"
+
+cd "${AUTOPKGTEST_TMP}"
+gunzip -r *
+
+# Just for debugging
+set -x
+
+# Run basic functionality
+${pkg} -s 1 -k 41 -r sample_example/reads1.fq -r sample_example/reads2.fq -r sample_example/readsN.fq



View it on GitLab: https://salsa.debian.org/med-team/kissplice/compare/ed75a417e5b55b4f54fff38a5902632b9cbc5d9b...a2cbd36aff809b826957be8564c1dc0e8f87fb37

-- 
View it on GitLab: https://salsa.debian.org/med-team/kissplice/compare/ed75a417e5b55b4f54fff38a5902632b9cbc5d9b...a2cbd36aff809b826957be8564c1dc0e8f87fb37
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