[med-svn] [Git][med-team/libbpp-raa][master] 7 commits: Rebuild for new version of gcc to fix symbols

Wed Aug 21 09:45:44 BST 2019


Andreas Tille pushed to branch master at Debian Med / libbpp-raa


Commits:
504c0460 by Andreas Tille at 2019-08-21T08:30:41Z
Rebuild for new version of gcc to fix symbols

- - - - -
0b86a55e by Andreas Tille at 2019-08-21T08:31:20Z
Provide symbols file for amd64 only

- - - - -
f3f7aac4 by Andreas Tille at 2019-08-21T08:31:41Z
debhelper-compat 12

- - - - -
8cd3b1ce by Andreas Tille at 2019-08-21T08:31:44Z
Standards-Version: 4.4.0

- - - - -
b1217ae0 by Andreas Tille at 2019-08-21T08:31:45Z
Remove trailing whitespace in debian/copyright

- - - - -
37a64aa4 by Andreas Tille at 2019-08-21T08:31:50Z
Set upstream metadata fields: Contact, Name.

Fixes lintian: upstream-metadata-file-is-missing
See https://lintian.debian.org/tags/upstream-metadata-file-is-missing.html for more details.

- - - - -
51b6eaf4 by Andreas Tille at 2019-08-21T08:32:59Z
Upload to unstable

- - - - -


6 changed files:

- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- debian/libbpp-raa4.symbols → debian/libbpp-raa4.symbols.amd64
- + debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,8 +1,18 @@
-libbpp-raa (2.4.1-2) UNRELEASED; urgency=medium
+libbpp-raa (2.4.1-2) unstable; urgency=medium
 
+  [ Jelmer Vernooĳ ]
   * Use secure copyright file specification URI.
 
- -- Jelmer Vernooĳ <jelmer at debian.org>  Wed, 24 Oct 2018 22:54:07 +0000
+  [ Andreas Tille ]
+  * Rebuild for new version of gcc to fix symbols
+    Closes: #925735
+  * Provide symbols file for amd64 only
+  * debhelper-compat 12
+  * Standards-Version: 4.4.0
+  * Remove trailing whitespace in debian/copyright
+  * Set upstream metadata fields: Contact, Name.
+
+ -- Andreas Tille <tille at debian.org>  Wed, 21 Aug 2019 10:31:51 +0200
 
 libbpp-raa (2.4.1-1) unstable; urgency=medium
 


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11


=====================================
debian/control
=====================================
@@ -4,12 +4,12 @@ Uploaders: Julien Dutheil <julien.dutheil at univ-montp2.fr>,
            Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 12),
                cmake,
                d-shlibs (>= 0.80),
                zlib1g-dev,
                libbpp-seq-dev (>= 2.4.1)
-Standards-Version: 4.2.0
+Standards-Version: 4.4.0
 Vcs-Browser: https://salsa.debian.org/med-team/libbpp-raa
 Vcs-Git: https://salsa.debian.org/med-team/libbpp-raa.git
 Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page


=====================================
debian/copyright
=====================================
@@ -23,7 +23,7 @@ License: GPL-2+
     it under the terms of the GNU General Public License as published by
     the Free Software Foundation; either version 2 of the License, or
     (at your option) any later version.
- . 
+ .
     This package is distributed in the hope that it will be useful,
     but WITHOUT ANY WARRANTY; without even the implied warranty of
     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
@@ -163,7 +163,7 @@ License: CeCILL
  .
  The purpose of the Agreement is the grant by the Licensor to the
  Licensee of a non-exclusive, transferable and worldwide license for the
- Software as set forth in Article 5 hereinafter for the whole term of the 
+ Software as set forth in Article 5 hereinafter for the whole term of the
  protection granted by the rights over said Software.
  .
  .
@@ -183,7 +183,7 @@ License: CeCILL
  characteristics of the Software, to the limited warranty, and to the
  fact that its use is restricted to experienced users has been provided
  to the Licensee prior to its acceptance as set forth in Article 3.1
- hereinabove, and the Licensee hereby acknowledges that it has read and 
+ hereinabove, and the Licensee hereby acknowledges that it has read and
  understood it.
  .
  .
@@ -431,7 +431,7 @@ License: CeCILL
  9.3 The Licensee acknowledges that the Software is supplied "as is" by
  the Licensor without any other express or tacit warranty, other than
  that provided for in Article 9.2 and, in particular, without any warranty
- as to its commercial value, its secured, safe, innovative or relevant 
+ as to its commercial value, its secured, safe, innovative or relevant
  nature.
  .
  Specifically, the Licensor does not warrant that the Software is free


=====================================
debian/libbpp-raa4.symbols → debian/libbpp-raa4.symbols.amd64
=====================================
@@ -17,6 +17,7 @@ libbpp-raa.so.4 libbpp-raa4 #MINVER#
  _ZN3bpp17AlphabetExceptionD0Ev at Base 2.4.1
  _ZN3bpp17AlphabetExceptionD1Ev at Base 2.4.1
  _ZN3bpp17AlphabetExceptionD2Ev at Base 2.4.1
+ _ZN3bpp20AbstractCoreSequence11setCommentsERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE at Base 2.4.1
  _ZN3bpp3RAA10deleteListEPNS_7RaaListE at Base 2.4.1
  _ZN3bpp3RAA10getSeqFragERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiiRS6_ at Base 2.4.1
  _ZN3bpp3RAA10getSeqFragEiiiRNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 2.4.1
@@ -76,10 +77,11 @@ libbpp-raa.so.4 libbpp-raa4 #MINVER#
  _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_ at Base 2.4.1
  _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev at Base 2.4.1
  _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev at Base 2.4.1
- _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPKcEEvT_S8_St20forward_iterator_tag at Base 2.4.1
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEaSERKS7_ at Base 2.4.1
  _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag at Base 2.4.1
  _ZTINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 2.4.1
  _ZTSNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 2.4.1
+ _ZTv0_n72_N3bpp20AbstractCoreSequence11setCommentsERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE at Base 2.4.1
  ajout_reponse at Base 2.4.1
  aminoacids at Base 2.4.1
  atoi_u at Base 2.4.1


=====================================
debian/upstream/metadata
=====================================
@@ -0,0 +1,2 @@
+Name: Bpp-Raa
+Contact: Julien Yann Dutheil <julien.dutheil at univ-montp2.fr>



View it on GitLab: https://salsa.debian.org/med-team/libbpp-raa/compare/2cc80cd71e68a57caf5154f7f18c973613796e7e...51b6eaf4fffbd1e83b8a66c8f4c856e90e853695

-- 
View it on GitLab: https://salsa.debian.org/med-team/libbpp-raa/compare/2cc80cd71e68a57caf5154f7f18c973613796e7e...51b6eaf4fffbd1e83b8a66c8f4c856e90e853695
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