[med-svn] [Git][med-team/unanimity][master] 5 commits: New upstream version 4.1.0

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / unanimity


Commits:
1f1780ae by Andreas Tille at 2019-12-18T16:01:30Z
New upstream version 4.1.0
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78793677 by Andreas Tille at 2019-12-18T16:24:56Z
New upstream version 3.4.1+git20180307.02aa264
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7ad208f7 by Andreas Tille at 2019-12-18T16:26:15Z
New upstream version 3.4.1+git20180307.02aa264+dfsg
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da3d7e10 by Andreas Tille at 2019-12-18T16:26:18Z
Update upstream source from tag 'upstream/3.4.1+git20180307.02aa264+dfsg'

Update to upstream version '3.4.1+git20180307.02aa264+dfsg'
with Debian dir 432b67005a03d7d451c9471ae37be620b517570f
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b81e03b2 by Andreas Tille at 2019-12-18T16:33:16Z
This is the last release of unanimity obtained from Git

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30 changed files:

- + .clang-format
- + CHANGELOG.md
- + CMakeLists.txt
- LICENSE
- README.md
- + bamboo_build.sh
- + circle.yml
- + cmake/uny-ccache.cmake
- + cmake/uny-codecoverage.cmake
- + cmake/uny-compilerflags.cmake
- + cmake/uny-config.cmake
- + cmake/uny-dependencies.cmake
- + cmake/uny-findpythonpath.cmake
- + cmake/uny-gitsha1.cmake
- + cmake/uny-releasewithassert.cmake
- + debian/README.source
- debian/changelog
- debian/watch
- + doc/ConsensusCore2-DesignAndImplementation/Makefile
- + doc/ConsensusCore2-DesignAndImplementation/ZScoreMath.rst
- + doc/ConsensusCore2-DesignAndImplementation/conf.py
- + doc/ConsensusCore2-DesignAndImplementation/img/Unanimity_Hierarchy.png
- + doc/ConsensusCore2-DesignAndImplementation/img/ZScore-HMM-figures.jpeg
- + doc/ConsensusCore2-DesignAndImplementation/img/consensus-modalities.pdf
- + doc/ConsensusCore2-DesignAndImplementation/img/consensus-modalities.png
- + doc/ConsensusCore2-DesignAndImplementation/img/hmms.pdf
- + doc/ConsensusCore2-DesignAndImplementation/img/hmms.png
- + doc/ConsensusCore2-DesignAndImplementation/img/pacbioHMM.svg.png
- + doc/ConsensusCore2-DesignAndImplementation/index.rst
- + doc/ConsensusCore2-DesignAndImplementation/make.bat


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/unanimity/compare/30ceca7b890b941ad7c02cc11571c26c62651193...b81e03b27a36704486f6b662494e0124344789b5

-- 
View it on GitLab: https://salsa.debian.org/med-team/unanimity/compare/30ceca7b890b941ad7c02cc11571c26c62651193...b81e03b27a36704486f6b662494e0124344789b5
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