[med-svn] [Git][med-team/unanimity][upstream] 3 commits: New upstream version 4.1.0

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / unanimity


Commits:
1f1780ae by Andreas Tille at 2019-12-18T16:01:30Z
New upstream version 4.1.0
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78793677 by Andreas Tille at 2019-12-18T16:24:56Z
New upstream version 3.4.1+git20180307.02aa264
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7ad208f7 by Andreas Tille at 2019-12-18T16:26:15Z
New upstream version 3.4.1+git20180307.02aa264+dfsg
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30 changed files:

- + .clang-format
- + CHANGELOG.md
- + CMakeLists.txt
- LICENSE
- README.md
- + bamboo_build.sh
- + circle.yml
- + cmake/uny-ccache.cmake
- + cmake/uny-codecoverage.cmake
- + cmake/uny-compilerflags.cmake
- + cmake/uny-config.cmake
- + cmake/uny-dependencies.cmake
- + cmake/uny-findpythonpath.cmake
- + cmake/uny-gitsha1.cmake
- + cmake/uny-releasewithassert.cmake
- + doc/ConsensusCore2-DesignAndImplementation/Makefile
- + doc/ConsensusCore2-DesignAndImplementation/ZScoreMath.rst
- + doc/ConsensusCore2-DesignAndImplementation/conf.py
- + doc/ConsensusCore2-DesignAndImplementation/img/Unanimity_Hierarchy.png
- + doc/ConsensusCore2-DesignAndImplementation/img/ZScore-HMM-figures.jpeg
- + doc/ConsensusCore2-DesignAndImplementation/img/consensus-modalities.pdf
- + doc/ConsensusCore2-DesignAndImplementation/img/consensus-modalities.png
- + doc/ConsensusCore2-DesignAndImplementation/img/hmms.pdf
- + doc/ConsensusCore2-DesignAndImplementation/img/hmms.png
- + doc/ConsensusCore2-DesignAndImplementation/img/pacbioHMM.svg.png
- + doc/ConsensusCore2-DesignAndImplementation/index.rst
- + doc/ConsensusCore2-DesignAndImplementation/make.bat
- + doc/DEVELOPER.md
- + doc/INSTALL.md
- + doc/JULIET.md


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/unanimity/compare/6cfd330e13912bd75eba5bbd310373ac94e06e07...7ad208f73b8ab223b23ce8fe201b72289ba45a22

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View it on GitLab: https://salsa.debian.org/med-team/unanimity/compare/6cfd330e13912bd75eba5bbd310373ac94e06e07...7ad208f73b8ab223b23ce8fe201b72289ba45a22
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