[med-svn] [Git][med-team/ugene][master] 5 commits: New upstream version 1.31.1+dfsg1

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / ugene


Commits:
e586841c by Andreas Tille at 2019-02-01T10:55:34Z
New upstream version 1.31.1+dfsg1
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34351cf7 by Andreas Tille at 2019-02-01T10:56:05Z
Update upstream source from tag 'upstream/1.31.1+dfsg1'

Update to upstream version '1.31.1+dfsg1'
with Debian dir 160fbe22f33a5ebcf71d9d58737c6f470b73af85
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dffbe359 by Andreas Tille at 2019-02-01T10:58:40Z
Do not exclude UGENE's own qmake control files to enable excluding third party code properly

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30f2e2a6 by Andreas Tille at 2019-02-01T10:59:18Z
ONce we are removing stuff also exclude CMake input files since these are only experimental

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ec96824b by Andreas Tille at 2019-02-05T14:53:20Z
Use UGENE_USE_BUNDLED_ZLIB=0

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30 changed files:

- − CMakeLists.txt
- debian/changelog
- debian/copyright
- − debian/patches/debian_packaged_libs.patch
- debian/patches/series
- debian/rules
- − src/corelibs/U2Algorithm/CMakeLists.txt
- − src/corelibs/U2Core/CMakeLists.txt
- − src/corelibs/U2Designer/CMakeLists.txt
- − src/corelibs/U2Formats/CMakeLists.txt
- − src/corelibs/U2Gui/CMakeLists.txt
- − src/corelibs/U2Lang/CMakeLists.txt
- − src/corelibs/U2Private/CMakeLists.txt
- − src/corelibs/U2Test/CMakeLists.txt
- − src/corelibs/U2View/CMakeLists.txt
- − src/libs_3rdparty/breakpad/CMakeLists.txt
- − src/libs_3rdparty/samtools/CMakeLists.txt
- + src/libs_3rdparty/sqlite3/sqlite3.pri
- + src/libs_3rdparty/sqlite3/sqlite3.pro
- + src/libs_3rdparty/zlib/zlib.pri
- + src/libs_3rdparty/zlib/zlib.pro
- − src/plugins/CoreTests/CMakeLists.txt
- − src/plugins/annotator/CMakeLists.txt
- − src/plugins/api_tests/CMakeLists.txt
- − src/plugins/biostruct3d_view/CMakeLists.txt
- − src/plugins/browser_support/CMakeLists.txt
- − src/plugins/chroma_view/CMakeLists.txt
- − src/plugins/circular_view/CMakeLists.txt
- − src/plugins/clark_support/CMakeLists.txt
- − src/plugins/dbi_bam/CMakeLists.txt


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/ugene/compare/95018739a92f4c7e454bee8a5b47c20bccedc51a...ec96824b7362a202448cd0b235a5a4fc03953870

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View it on GitLab: https://salsa.debian.org/med-team/ugene/compare/95018739a92f4c7e454bee8a5b47c20bccedc51a...ec96824b7362a202448cd0b235a5a4fc03953870
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