[med-svn] [Git][med-team/ncbi-entrez-direct][master] 25 commits: New upstream version 10.5.20181205+ds

[Aaron M. Ucko]

Aaron M. Ucko pushed to branch master at Debian Med / ncbi-entrez-direct


Commits:
566f983f by Aaron M. Ucko at 2019-02-07T02:17:56Z
New upstream version 10.5.20181205+ds
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11778b93 by Aaron M. Ucko at 2019-02-07T02:22:25Z
New upstream version 10.6.20181210+ds
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881990d5 by Aaron M. Ucko at 2019-02-07T02:57:10Z
Update upstream source from tag 'upstream/10.5.20181205+ds'.

Update to upstream version '10.5.20181205+ds'
with Debian dir 4fb771987cf9b5d89fe68a4d8b0522858e6d90ab
(and a formal changelog update).

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ed7fe14c by Aaron M. Ucko at 2019-02-07T03:02:48Z
Update upstream source from tag 'upstream/10.6.20181210+ds'

Update to upstream version '10.6.20181210+ds'
with Debian dir cec6cfeb78aad237968dd4928af9405fb5d78efe
(and a formal changelog update).

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9e26fb2f by Aaron M. Ucko at 2019-02-07T03:03:11Z
debian/rules: Stop installing retired scripts.

Drop local-phrase-search and (implicitly, due to wildcarding)
pm-{clean,current,erase,log,repack,uids,verify}.

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bda95aa1 by Aaron M. Ucko at 2019-02-07T03:03:13Z
Update man pages for new release (10.6.20181210[+ds]).

* Retire {local-phrase-search,pm-{clean,current,erase,log,repack,uids,
  verify}}.1; update SEE ALSO accordingly.
* xtract.1: New -reverse flag (under Text Processing).

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f8c4a9ae by Aaron M. Ucko at 2019-02-07T03:04:42Z
New upstream version 10.6.20190103+ds
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e0362d87 by Aaron M. Ucko at 2019-02-07T03:06:27Z
Update upstream source from tag 'upstream/10.6.20190103+ds'

Update to upstream version '10.6.20190103+ds'
with Debian dir 2cfa18781741d5378733474cbf8bd13ebe5bbf22
(and a formal changelog update).

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04a4e257 by Aaron M. Ucko at 2019-02-07T03:09:02Z
efilter.1: Add SNP Filters (just -class so far).

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12290890 by Aaron M. Ucko at 2019-02-07T03:10:04Z
New upstream version 10.7.20190104+ds
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57afc8b8 by Aaron M. Ucko at 2019-02-07T03:11:32Z
Merge tag 'upstream/10.7.20190104+ds'

Upstream version 10.7.20190104(+ds).

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fdcd05d4 by Aaron M. Ucko at 2019-02-07T03:12:12Z
Merge tag 'upstream/10.7.20190114+ds'

Upstream version 10.7.20190114+ds

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1ce3c44a by Aaron M. Ucko at 2019-02-07T03:12:12Z
New upstream version 10.7.20190114+ds
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bd349cb8 by Aaron M. Ucko at 2019-02-07T03:14:03Z
xtract.1: Add -nucleic (under Sequence Processing).

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4357532b by Aaron M. Ucko at 2019-02-07T03:15:12Z
New upstream version 10.8.20190117+ds
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586fd935 by Aaron M. Ucko at 2019-02-07T03:23:05Z
Merge tag 'upstream/10.8.20190117+ds'

Upstream version 10.8.20190117(+ds).

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d8a931c2 by Aaron M. Ucko at 2019-02-07T03:23:19Z
Update man pages for new release (10.8.20190117[+ds]).

* edirect.1: Document new EDIRECT_DO_AUTO_ABBREV environment variable.
* {efilter,esearch,espell}.1: Note that -query can always be
  abbreviated as -q.

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093bb44f by Aaron M. Ucko at 2019-02-07T03:25:17Z
New upstream version 10.8.20190128+ds
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87f881f2 by Aaron M. Ucko at 2019-02-07T03:25:42Z
Merge tag 'upstream/10.8.20190128+ds'

Upstream version 10.8.20190128(+ds).

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0ff7f663 by Aaron M. Ucko at 2019-02-07T03:36:08Z
Update man pages for new release (10.8.20190128[+ds]).

* efilter.1: Add -journal and -released (Publication Filters); move
  some -pub values to -released.
* transmute.1: Limit documentation to -j2x and -x2j for now, since
  usage methods no longer mention anything else; describe them in
  alphabetical order (accidentally swapped earlier).

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492cba4e by Aaron M. Ucko at 2019-02-07T03:38:28Z
New upstream version 10.9.20190131+ds
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53ca0250 by Aaron M. Ucko at 2019-02-07T03:39:13Z
Merge tag 'upstream/10.9.20190131+ds'

Upstream version 10.9.20190131(+ds).

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1c42e99e by Aaron M. Ucko at 2019-02-07T03:39:48Z
New upstream version 10.9.20190205+ds
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71e8f128 by Aaron M. Ucko at 2019-02-07T03:40:21Z
Merge tag 'upstream/10.9.20190205+ds'

Upstream version 10.9.20190205(+ds).

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794603e8 by Aaron M. Ucko at 2019-02-07T03:52:26Z
Finalize ncbi-entrez-direct 10.9.20190205+ds-1 for unstable.

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30 changed files:

- README
- archive-pubmed
- debian/changelog
- debian/man/archive-pubmed.1
- debian/man/download-pubmed.1
- debian/man/edirect.1
- debian/man/efilter.1
- debian/man/entrez-phrase-search.1
- debian/man/esearch.1
- debian/man/espell.1
- debian/man/fetch-pubmed.1
- debian/man/index-pubmed.1
- − debian/man/local-phrase-search.1
- debian/man/phrase-search.1
- − debian/man/pm-clean.1
- − debian/man/pm-current.1
- − debian/man/pm-erase.1
- − debian/man/pm-log.1
- − debian/man/pm-repack.1
- − debian/man/pm-uids.1
- − debian/man/pm-verify.1
- debian/man/rchive.1
- debian/man/stream-pubmed.1
- debian/man/transmute.1
- debian/man/xtract.1
- debian/patches/debian-changes
- debian/rules
- edirect.pl
- index-pubmed
- − local-phrase-search


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/ncbi-entrez-direct/compare/76f9cae57f0fac6cdfdf38ec7204206acdb84860...794603e88c010cdf21f660341356b7a8bdf1f2ce

-- 
View it on GitLab: https://salsa.debian.org/med-team/ncbi-entrez-direct/compare/76f9cae57f0fac6cdfdf38ec7204206acdb84860...794603e88c010cdf21f660341356b7a8bdf1f2ce
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