[med-svn] [Git][med-team/libseqlib][master] 3 commits: Adapt symbols to new version of gcc

Andreas Tille gitlab at salsa.debian.org
Wed Feb 27 09:51:49 GMT 2019


Andreas Tille pushed to branch master at Debian Med / libseqlib


Commits:
791725d0 by Andreas Tille at 2019-02-27T09:48:01Z
Adapt symbols to new version of gcc

- - - - -
5ba51159 by Andreas Tille at 2019-02-27T09:48:16Z
Standards-Version: 4.3.0

- - - - -
e7f4c664 by Andreas Tille at 2019-02-27T09:50:15Z
Upload to unstable

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/libseqlib1.symbols


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+libseqlib (1.1.2+dfsg-3) unstable; urgency=medium
+
+  * Adapt symbols to new version of gcc
+    Closes: #923382
+
+ -- Andreas Tille <tille at debian.org>  Wed, 27 Feb 2019 10:48:25 +0100
+
 libseqlib (1.1.2+dfsg-2) unstable; urgency=medium
 
   * Adapt symbols file to new gcc-8


=====================================
debian/control
=====================================
@@ -13,7 +13,7 @@ Build-Depends: debhelper (>= 11~),
                libbwa-dev (>= 0.7.15-3),
                libjsoncpp-dev,
                libssw-dev
-Standards-Version: 4.2.0
+Standards-Version: 4.3.0
 Vcs-Browser: https://salsa.debian.org/med-team/libseqlib
 Vcs-Git: https://salsa.debian.org/med-team/libseqlib.git
 Homepage: https://github.com/walaj/SeqLib


=====================================
debian/libseqlib1.symbols
=====================================
@@ -57,7 +57,6 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZN6SeqLib14FermiAssemblerC2Ev at Base 1.1.1+dfsg
  _ZN6SeqLib14FermiAssemblerD1Ev at Base 1.1.1+dfsg
  _ZN6SeqLib14FermiAssemblerD2Ev at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib15cigarFromStringERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.1.1+dfsg
  _ZN6SeqLib17UnalignedSequenceD1Ev at Base 1.1.1+dfsg
  _ZN6SeqLib17UnalignedSequenceD2Ev at Base 1.1.1+dfsg
  _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE12allocate_grcEv at Base 1.1.1+dfsg
@@ -74,22 +73,11 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEED1Ev at Base 1.1.1+dfsg
  _ZN6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEED2Ev at Base 1.1.1+dfsg
  _ZN6SeqLib3BFC11AddSequenceEPKcS2_S2_ at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC11AddSequenceERKNS_9BamRecordE at Base 1.1.1+dfsg
  _ZN6SeqLib3BFC11GetSequenceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES7_ at Base 1.1.2+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC12ErrorCorrectERKSt6vectorINS_9BamRecordESaIS2_EE at Base 1.1.1+dfsg
  _ZN6SeqLib3BFC12ErrorCorrectEv at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC12FilterUniqueEv at Base 1.1.1+dfsg
  _ZN6SeqLib3BFC13correct_readsEv at Base 1.1.1+dfsg
  _ZN6SeqLib3BFC13learn_correctEv at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC14AllocateMemoryEm at Base 1.1.1+dfsg
  _ZN6SeqLib3BFC15CorrectSequenceERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKS6_ at Base 1.1.2+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC15TrainAndCorrectERKSt6vectorINS_9BamRecordESaIS2_EE at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC15TrainCorrectionERKSt6vectorINS_9BamRecordESaIS2_EE at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC15TrainCorrectionERKSt6vectorIPcSaIS2_EE at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC17ErrorCorrectToTagERSt6vectorINS_9BamRecordESaIS2_EERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC19ErrorCorrectInPlaceERSt6vectorINS_9BamRecordESaIS2_EE at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC28allocate_sequences_from_charERKSt6vectorIPcSaIS2_EE at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZN6SeqLib3BFC29allocate_sequences_from_readsERKSt6vectorINS_9BamRecordESaIS2_EE at Base 1.1.1+dfsg
  _ZN6SeqLib3BFC5TrainEv at Base 1.1.1+dfsg
  _ZN6SeqLib3BFC5clearEv at Base 1.1.1+dfsg
  _ZN6SeqLib4_Bam20open_BAM_for_readingEv at Base 1.1.1+dfsg
@@ -108,8 +96,6 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZN6SeqLib6Filter10ReadFilterD1Ev at Base 1.1.1+dfsg
  _ZN6SeqLib6Filter10ReadFilterD2Ev at Base 1.1.1+dfsg
  _ZN6SeqLib6Filter11AhoCorasick12TrieFromFileERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.1.1+dfsg
- _ZN6SeqLib6Filter11AhoCorasickD1Ev at Base 1.1.1+dfsg
- _ZN6SeqLib6Filter11AhoCorasickD2Ev at Base 1.1.1+dfsg
  _ZN6SeqLib6Filter12AbstractRule12addMotifRuleERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEb at Base 1.1.1+dfsg
  _ZN6SeqLib6Filter12AbstractRule12parseSeqLineERKN4Json5ValueE at Base 1.1.1+dfsg
  _ZN6SeqLib6Filter12AbstractRule12parseSubLineERKN4Json5ValueE at Base 1.1.1+dfsg
@@ -214,7 +200,6 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZNK6SeqLib14FermiAssembler10GetContigsB5cxx11Ev at Base 1.1.1+dfsg
  _ZNK6SeqLib14FermiAssembler12GetSequencesEv at Base 1.1.1+dfsg
  _ZNK6SeqLib23GenomicRegionCollectionINS_13GenomicRegionEE13CountOverlapsERKS1_ at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZNK6SeqLib3BFC12GetSequencesERSt6vectorINS_17UnalignedSequenceESaIS2_EE at Base 1.1.1+dfsg
  _ZNK6SeqLib5CigareqERKS0_ at Base 1.1.1+dfsg
  _ZNK6SeqLib6Filter10ReadFilter23isReadOverlappingRegionERKNS_9BamRecordE at Base 1.1.1+dfsg
  _ZNK6SeqLib6Filter11AhoCorasick9QueryTextERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.1.1+dfsg
@@ -235,9 +220,9 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZNK6SeqLib9BamRecord11CountNBasesEv at Base 1.1.1+dfsg
  _ZNK6SeqLib9BamRecord11PositionEndEv at Base 1.1.2+dfsg
  _ZNK6SeqLib9BamRecord14GetSmartIntTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg-1# _ZNK6SeqLib9BamRecord14ParseReadGroupB5cxx11Ev at Base 1.1.1+dfsg
+ _ZNK6SeqLib9BamRecord14ParseReadGroupB5cxx11Ev at Base 1.1.2+dfsg
  _ZNK6SeqLib9BamRecord15AsGenomicRegionEv at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg-1# _ZNK6SeqLib9BamRecord15PairOrientationEv at Base 1.1.1+dfsg
+ _ZNK6SeqLib9BamRecord15PairOrientationEv at Base 1.1.2+dfsg
  _ZNK6SeqLib9BamRecord15PositionEndMateEv at Base 1.1.2+dfsg
  _ZNK6SeqLib9BamRecord15QualitySequenceB5cxx11Ev at Base 1.1.1+dfsg
  _ZNK6SeqLib9BamRecord17GetSmartDoubleTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.1.1+dfsg
@@ -248,7 +233,6 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZNK6SeqLib9BamRecord26CountBWAChimericAlignmentsEv at Base 1.1.1+dfsg
  _ZNK6SeqLib9BamRecord27CountBWASecondaryAlignmentsEv at Base 1.1.1+dfsg
  _ZNK6SeqLib9BamRecord6GetTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_ at Base 1.1.2+dfsg
-#MISSING: 1.1.2+dfsg# _ZNK6SeqLib9BamRecord7GetZTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE at Base 1.1.1+dfsg
  _ZNK6SeqLib9BamRecord7GetZTagERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS6_ at Base 1.1.2+dfsg
  _ZNK6SeqLib9BamRecord8SequenceB5cxx11Ev at Base 1.1.1+dfsg
  _ZNK6SeqLib9BamRecord9MeanPhredEv at Base 1.1.1+dfsg
@@ -259,22 +243,20 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE5countERS7_ at Base 1.1.1+dfsg
  _ZNKSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE19_M_find_before_nodeEmRS7_m at Base 1.1.1+dfsg
  _ZNKSt5ctypeIcE8do_widenEc at Base 1.1.1+dfsg
+ _ZNKSt6vectorIN6SeqLib13GenomicRegionESaIS1_EE12_M_check_lenEmPKc at Base 1.1.2+dfsg
  _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE10_M_emplaceIJS6_IS5_S9_EEEES6_INSC_14_Node_iteratorISA_Lb0ELb1EEEbESt17integral_constantIbLb1EEDpOT_ at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg-1# _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE21_M_insert_unique_nodeEmmPNSC_10_Hash_nodeISA_Lb1EEE at Base 1.1.1+dfsg
  _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE21_M_insert_unique_nodeEmmPNSC_10_Hash_nodeISA_Lb1EEEm at Base 1.1.2+dfsg
-#MISSING: 1.1.2+dfsg-1# _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N6SeqLib4_BamEESaISA_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSC_18_Mod_range_hashingENSC_20_Default_ranged_hashENSC_20_Prime_rehash_policyENSC_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEmRKm at Base 1.1.1+dfsg
  _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE10_M_emplaceIJS6_IS5_iEEEES6_INSA_14_Node_iteratorIS8_Lb0ELb1EEEbESt17integral_constantIbLb1EEDpOT_ at Base 1.1.1+dfsg
  _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE21_M_insert_unique_nodeEmmPNSA_10_Hash_nodeIS8_Lb1EEEm at Base 1.1.2+dfsg
-#MISSING: 1.1.2+dfsg-1# _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEE9_M_rehashEmRKm at Base 1.1.1+dfsg
  _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEED1Ev at Base 1.1.1+dfsg
  _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESaIS8_ENSt8__detail10_Select1stESt8equal_toIS5_ESt4hashIS5_ENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb1ELb0ELb1EEEED2Ev at Base 1.1.1+dfsg
  _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE10_M_emplaceIJS0_IiS4_EEEES0_INS7_14_Node_iteratorIS5_Lb0ELb0EEEbESt17integral_constantIbLb1EEDpOT_ at Base 1.1.2+dfsg
-#MISSING: 1.1.2+dfsg-1# _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE21_M_insert_unique_nodeEmmPNS7_10_Hash_nodeIS5_Lb0EEE at Base 1.1.1+dfsg
+ _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE21_M_insert_unique_nodeEmmPNS7_10_Hash_nodeIS5_Lb0EEEm at Base 1.1.2+dfsg
  _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE5clearEv at Base 1.1.1+dfsg
  _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEmRKm at Base 1.1.1+dfsg
  _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev at Base 1.1.1+dfsg
  _ZNSt10_HashtableIiSt4pairIKiN6SeqLib13TIntervalTreeIimEEESaIS5_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg-1# _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE21_M_insert_unique_nodeEmmPNSA_10_Hash_nodeIS8_Lb0EEE at Base 1.1.1+dfsg
+ _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE21_M_insert_unique_nodeEmmPNSA_10_Hash_nodeIS8_Lb0EEEm at Base 1.1.2+dfsg
  _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEE9_M_rehashEmRKm at Base 1.1.1+dfsg
  _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED1Ev at Base 1.1.1+dfsg
  _ZNSt10_HashtableIiSt4pairIKiSt6vectorIN6SeqLib9TIntervalIimEESaIS5_EEESaIS8_ENSt8__detail10_Select1stESt8equal_toIiESt4hashIiENSA_18_Mod_range_hashingENSA_20_Default_ranged_hashENSA_20_Prime_rehash_policyENSA_17_Hashtable_traitsILb0ELb0ELb1EEEED2Ev at Base 1.1.1+dfsg
@@ -343,7 +325,6 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZNSt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEN6SeqLib4_BamEED2Ev at Base 1.1.1+dfsg
  _ZNSt5dequeIPN12aho_corasick5stateIcEESaIS3_EE16_M_push_back_auxIJRKS3_EEEvDpOT_ at Base 1.1.1+dfsg
  _ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.1.1+dfsg
- _ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.1.2+dfsg
  _ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPS2_S4_EE at Base 1.1.1+dfsg
  _ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE9push_backERKS2_ at Base 1.1.1+dfsg
  _ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EEC1ERKS4_ at Base 1.1.1+dfsg
@@ -359,12 +340,10 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZNSt6vectorIN6SeqLib14HeaderSequenceESaIS1_EE17_M_realloc_insertIJS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_ at Base 1.1.1+dfsg
  _ZNSt6vectorIN6SeqLib15PlottedReadLineESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_ at Base 1.1.1+dfsg
  _ZNSt6vectorIN6SeqLib17UnalignedSequenceESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_ at Base 1.1.1+dfsg
-#MISSING: 1.1.2+dfsg# _ZNSt6vectorIN6SeqLib17UnalignedSequenceESaIS1_EE17_M_realloc_insertIJS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_ at Base 1.1.1+dfsg
  _ZNSt6vectorIN6SeqLib6Filter10ReadFilterESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.1.1+dfsg
  _ZNSt6vectorIN6SeqLib6Filter12AbstractRuleESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.1.1+dfsg
  _ZNSt6vectorIN6SeqLib9BamRecordESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_ at Base 1.1.1+dfsg
  _ZNSt6vectorIN6SeqLib9TIntervalIimEESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.1.1+dfsg
- _ZNSt6vectorIN6SeqLib9TIntervalIimEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 1.1.2+dfsg
  _ZNSt6vectorIN6SeqLib9TIntervalIimEESaIS2_EEaSERKS4_ at Base 1.1.1+dfsg
  _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE12emplace_backIJS5_EEEvDpOT_ at Base 1.1.1+dfsg
  _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_ at Base 1.1.1+dfsg
@@ -387,7 +366,6 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED2Ev at Base 1.1.1+dfsg
  _ZNSt7__cxx114listIN6SeqLib13GenomicRegionESaIS2_EE4sortEv at Base 1.1.1+dfsg
  _ZNSt7__cxx114listIN6SeqLib13GenomicRegionESaIS2_EE5mergeEOS4_ at Base 1.1.1+dfsg
- _ZNSt8_Rb_treeIN12aho_corasick7ahoemitIcEES2_St9_IdentityIS2_ESt4lessIS2_ESaIS2_EE16_M_insert_uniqueIRKS2_EESt4pairISt17_Rb_tree_iteratorIS2_EbEOT_ at Base 1.1.2+dfsg
  _ZNSt8_Rb_treeIN12aho_corasick7ahoemitIcEES2_St9_IdentityIS2_ESt4lessIS2_ESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E at Base 1.1.1+dfsg
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EE16_M_insert_uniqueIRKS5_EESt4pairISt17_Rb_tree_iteratorIS5_EbEOT_ at Base 1.1.1+dfsg
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_St9_IdentityIS5_ESt4lessIS5_ESaIS5_EE7_M_copyINSB_11_Alloc_nodeEEEPSt13_Rb_tree_nodeIS5_EPKSF_PSt18_Rb_tree_node_baseRT_ at Base 1.1.1+dfsg
@@ -406,7 +384,6 @@ libseqlib.so.1 libseqlib1 #MINVER#
  _ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIPN6SeqLib11PlottedReadESt6vectorIS3_SaIS3_EEEElS3_NS0_5__ops15_Iter_less_iterEEvT_T0_SC_T1_T2_ at Base 1.1.1+dfsg
  _ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIPN6SeqLib13GenomicRegionESt6vectorIS3_SaIS3_EEEElS3_NS0_5__ops15_Iter_less_iterEEvT_T0_SC_T1_T2_ at Base 1.1.1+dfsg
  _ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIPN6SeqLib9TIntervalIimEESt6vectorIS4_SaIS4_EEEElS4_NS0_5__ops15_Iter_comp_iterINS2_19IntervalStartSorterIimEEEEEvT_T0_SG_T1_T2_ at Base 1.1.1+dfsg
- _ZSt13__heap_selectIN9__gnu_cxx17__normal_iteratorIPN6SeqLib13GenomicRegionESt6vectorIS3_SaIS3_EEEENS0_5__ops15_Iter_less_iterEEvT_SB_SB_T0_ at Base 1.1.2+dfsg
  _ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIPN12aho_corasick7ahoemitIcEESt6vectorIS4_SaIS4_EEEENS0_5__ops15_Iter_comp_iterIZNS2_13interval_treeIS4_E15remove_overlapsERKS8_EUlRKS4_SH_E0_EEEvT_SK_T0_ at Base 1.1.1+dfsg
  _ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIPN12aho_corasick7ahoemitIcEESt6vectorIS4_SaIS4_EEEENS0_5__ops15_Iter_comp_iterIZNS2_13interval_treeIS4_E15remove_overlapsERKS8_EUlRKS4_SH_E_EEEvT_SK_T0_ at Base 1.1.1+dfsg
  _ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIPN6SeqLib11PlottedReadESt6vectorIS3_SaIS3_EEEENS0_5__ops15_Iter_less_iterEEvT_SB_T0_ at Base 1.1.1+dfsg



View it on GitLab: https://salsa.debian.org/med-team/libseqlib/compare/9f62ec1a526fb1949883e93e3b3a13b2bfeee4a4...e7f4c66447a3c22a08dce101f64ece0c9145cbb5

-- 
View it on GitLab: https://salsa.debian.org/med-team/libseqlib/compare/9f62ec1a526fb1949883e93e3b3a13b2bfeee4a4...e7f4c66447a3c22a08dce101f64ece0c9145cbb5
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