[med-svn] [Git][med-team/minia][master] Build-Depends: libboost-dev, libgatbcore-dev; adapt build to use Debian packaged gatbcore

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / minia


Commits:
644ccd44 by Andreas Tille at 2019-01-22T11:52:02Z
Build-Depends: libboost-dev, libgatbcore-dev; adapt build to use Debian packaged gatbcore

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/series
- + debian/patches/use_debian_packaged_gatb-core.patch


Changes:

=====================================
debian/changelog
=====================================
@@ -10,6 +10,7 @@ minia (3.2.0-1) UNRELEASED; urgency=medium
   * Remove trailing whitespace in debian/changelog
   * Remove trailing whitespace in debian/control
   * Remove trailing whitespace in debian/copyright
+  * Build-Depends: libboost-dev, libgatbcore-dev
 
  -- Andreas Tille <tille at debian.org>  Mon, 21 Jan 2019 09:01:19 +0100
 


=====================================
debian/control
=====================================
@@ -8,6 +8,7 @@ Build-Depends: debhelper (>= 12~),
                cmake,
                bc,
                zlib1g-dev,
+               libboost-dev,
                libgatbcore-dev
 Standards-Version: 4.3.0
 Vcs-Browser: https://salsa.debian.org/med-team/minia


=====================================
debian/patches/series
=====================================
@@ -0,0 +1 @@
+use_debian_packaged_gatb-core.patch


=====================================
debian/patches/use_debian_packaged_gatb-core.patch
=====================================
@@ -0,0 +1,13 @@
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -42,8 +42,8 @@ add_definitions( -DGIT_SHA1="${VERSION_S
+ ################################################################################
+ # Define cmake modules directory
+ ################################################################################
+-SET (GATB_CORE_HOME  ${PROJECT_SOURCE_DIR}/thirdparty/gatb-core/gatb-core)
+-SET (CMAKE_MODULE_PATH ${GATB_CORE_HOME}/cmake)
++include(GNUInstallDirs)
++SET (CMAKE_MODULE_PATH /usr/${CMAKE_INSTALL_LIBDIR}/cmake)
+ 
+ ################################################################################
+ # SUPPORTED KMER SIZES



View it on GitLab: https://salsa.debian.org/med-team/minia/commit/644ccd440e9c268d37cb7c469a582150ea4ca25c

-- 
View it on GitLab: https://salsa.debian.org/med-team/minia/commit/644ccd440e9c268d37cb7c469a582150ea4ca25c
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