[med-svn] [Git][med-team/unanimity][upstream] New upstream version 3.3.0+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / unanimity


Commits:
e707cab2 by Andreas Tille at 2019-01-24T10:39:12Z
New upstream version 3.3.0+dfsg
- - - - -


1 changed file:

- README.md


Changes:

=====================================
README.md
=====================================
@@ -6,21 +6,10 @@
 
 ***
 ## Availability
-The latest pre-release, developers-only linux binaries can be installed via [bioconda](https://bioconda.github.io/).
+Latest `ccs` can be installed via bioconda package `pbccs`.
 
-    conda install pbccs
-
-These binaries are not ISO compliant.
-For research only.
-Not for use in diagnostics procedures.
-
-Official support is only provided for official and stable
-[SMRT Analysis builds](http://www.pacb.com/products-and-services/analytical-software/)
-provided by PacBio.
-No support for source builds.
-No support via mail to developers.
-
-Binaries on bioconda are newer than GitHub source code.
+Please refer to our [official pbbioconda page](https://github.com/PacificBiosciences/pbbioconda)
+for information on Installation, Support, License, Copyright, and Disclaimer.
 
 ## [Circular Consensus Calling](doc/PBCCS.md)
 
@@ -51,6 +40,17 @@ and place them in a subdirectory of `${SMRT_CHEMISTRY_BUNDLE_DIR}`:
 This will cause Unanimity to try to load models from all files in `${SMRT_CHEMISTRY_BUNDLE_DIR}/arrow`
 with a `.json` suffix.
 
+## Changelog
+
+ * **3.3.0**:
+   * Add a windowing approach to reduce computational complexity from quadratic to linear
+   * Improve multi-threading framework to increase throughput
+   * Enhance XML output, propagate `CollectionMetadata`
+   * Includes latest chemistry parameters
+ * 3.1.0:
+   * Add `--maxPoaCoverage` to decrease runtime for unpolished output, special parameter for IsoSeq workflow
+   * Chemistry parameters for SMRT Link v6.0
+
 ## License
 [PacBio open source license](LICENSE)
 



View it on GitLab: https://salsa.debian.org/med-team/unanimity/commit/e707cab2989b377de7e5c369a030bdab86459f6d

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View it on GitLab: https://salsa.debian.org/med-team/unanimity/commit/e707cab2989b377de7e5c369a030bdab86459f6d
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